Gene detail

Gene detail information of Glyur000087s00008570

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23530.1	2.00E-85	Zinc-finger domain of monoamine-oxidase A repressor R1
NR	XP_003516591.1	0	PREDICTED: cell division cycle-associated 7-like protein-like [Glycine max]
trEMBL	tr\|I1J924\|I1J924_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G38860.1}

Sequence

Transcript Sequence

>Glyur000087s00008570.1
ACAAGTAGGAGTGGGGAGAGAGAGAGAGAGAGAGAGAGTGAGGGCATTTTGTTTGGGGAGATTCCCTCCCATCAATCCCGCCGAGACCCCTTCTTATAAACACATAAAAAACCAGAGAGAAGAAAATCGACCGTTGCAGAGTTGGGGAGTTTCGAAGTTCAAAATCAAAGCCGCCACTCAGCAGCAATGCTTACTGAGAACAACCACCACGACCACGACCAAGATGTTGTCGATGATCAACACAACAAAATGTCTCGGTACGAGCTGTCCCGAGAACAAAGGATCCGCGAAAACCGTGAGAGGATGGGAAAACTGGGCATTTTCGACCTTTCACTCTCCCTCAAGCTCAAAACTTCACGCCGCAACACCCCATCCAACCCAAACCCCAAAACCCCTCCTTCTCTGCAACCCTCTGGCCCCGTTCGCCGCTCTTCCAGGTTGCAGAACGTGGCTCCTGTTAGTTACTCTGAAGAGCCCCACAAGAAAGCTGAGCGTGAGAGAAATGGGAAGATNGTGATAGAAGAAGGTTCCAAGCCAGAGGTATACACCGAAGAACATGAGAAGCTTTTGGGGAACACTGAGAAGAGCTGGACGCTGTTCGTGGATGGCGTTGGGAAGGATGGGAAACGGATTTATGACTCCGTTCAAGGGAAAACTTGCCATCAGTGCAGGCAAAAAACTCTTGGCTATCGTACACACTGTATCAGATGCAACATGGTCCAGGGGCAGTTTTGTGGAGATTGCTTGTACATGAGATATGGGGAGCATGTACTTGAAGCCTTGGAGAATCCANCTTGGATATGCCCGGTTTGTCGTGGAATTTGCAACTGTAGCTTATGCCGTCAAGCAAAAGGATGGGCTCCTACTGGCCCTCTATATAAAAAGATATCAGCATTGGGTTACAAATCAGTTGCACATTACCTCATTCAAACCCGACGGCACTCAGATATAGATGTTGAGAAAAATGCAGATGCTTCCAACCCAGTTTCAGCAAAAAGGTCACTACCTTTCTCTGATGAGGTCAATGAGAATAAGCTTGAGTCACTGAAGCCTCTAGCTGAAACTGAAAGTGATGGTGATGAGGTTGCGGCAAAGAGATCGTTGCCTTTCTCTGATAAGAAAGACCAGCTTGAAAAAGTTGAGGGTTCGAATACCATCGAAAAAGTCGAGTGTTCAGACACCACGAAGCCACTTGCTTCTTCCACCAAACCTTGCCCAGACAGCATTGCTGGAAGACTTAGGTCTAGGGCCAAAAAACCATGATTAATGAGGATGATTTCTCTTATCTTAACATTGCATATTGCTGAAGATATACATGCTGCTTAAGTTCCAAGAAAACATTGCGTTTTGAGAGATATCATTTGGGACGAAAACCTCTTTTGTCATAGTAGTATGTGAAACACTTCAACTCTTCAAGTATCATTGTTGTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00087	283014	285787	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000087s00008570.1	PF10497.4	zf-4CXXC_R1	149	247	8.00E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.851
SRR1783600	control	19.646
SRR1783602	moderate drought stress	38.690
SRR1811619	moderate drought stress	38.379

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	27.377
DRR006520	Root Summer glycyrrhizin high producing strain	27.288
DRR006521	Root Winter glycyrrhizin high producing strain	7.371
DRR006522	Root Winter glycyrrhizin high producing strain	7.029
DRR006523	Root Summer glycyrrhizin low producing strain	32.592
DRR006524	Root Summer glycyrrhizin low producing strain	32.957
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.537
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.541

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	34.661
SRR2868004	Drought Stress (root)	33.525
SRR2967015	Control (root)	43.118

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.783
SRR9715740	Leaf	1.568
SRR9715741	Leaf	1.868
SRR9715739	Root	9.932
SRR9715742	Root	13.757
SRR9715743	Root	12.562

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	50.893
SRR8749028	MeJA induced 9h	22.965
SRR8749029	MeJA induced 9h	33.314
SRR8749030	Uninduced	3.050
SRR8749031	Uninduced	1.248
SRR8749032	Uninduced	8.032

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.202
SRR8400027	Control - Root	25.685