Gene detail information of Glyur000087s00008567 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CAN59797.1 | 8.43E-08 | hypothetical protein VITISV_038869 [Vitis vinifera] |
| trEMBL | tr|A5BCN4|A5BCN4_VITVI | 3.00E-08 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN59797.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 267344 | 269191 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.275 |
| SRR1783600 | control | 9.126 |
| SRR1783602 | moderate drought stress | 3.509 |
| SRR1811619 | moderate drought stress | 7.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.894 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.867 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.459 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.859 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.053 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.278 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.949 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.958 |
| SRR2868004 | Drought Stress (root) | 1.838 |
| SRR2967015 | Control (root) | 1.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.168 |
| SRR9715741 | Leaf | 0.201 |
| SRR9715739 | Root | 0.047 |
| SRR9715742 | Root | 0.355 |
| SRR9715743 | Root | 0.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.268 |
| SRR8749028 | MeJA induced 9h | 0.236 |
| SRR8749029 | MeJA induced 9h | 0.093 |
| SRR8749030 | Uninduced | 0.016 |
| SRR8749031 | Uninduced | 0.002 |
| SRR8749032 | Uninduced | 0.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.427 |
| SRR8400027 | Control - Root | 0.602 |