Gene detail information of Glyur000087s00008554 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23360.1 | 1.00E-134 | Plant protein of unknown function (DUF869) |
| NR | XP_003517310.1 | 0 | PREDICTED: filament-like plant protein 7-like [Glycine max] |
| Swissprot | tr|Q9SLN1|FPP7_ARATH | 1.00E-164 | Filament-like plant protein 7 |
| trEMBL | tr|I1J988|I1J988_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 169800 | 174428 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000087s00008554.1 | PF05911.6 | DUF869 | 64 | 952 | 8.20E-187 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.690 |
| SRR1783600 | control | 2.719 |
| SRR1783602 | moderate drought stress | 2.253 |
| SRR1811619 | moderate drought stress | 2.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.994 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.912 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.436 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.426 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.666 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.689 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.944 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.178 |
| SRR2868004 | Drought Stress (root) | 3.954 |
| SRR2967015 | Control (root) | 3.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.196 |
| SRR9715740 | Leaf | 1.015 |
| SRR9715741 | Leaf | 1.024 |
| SRR9715739 | Root | 0.406 |
| SRR9715742 | Root | 1.915 |
| SRR9715743 | Root | 1.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.701 |
| SRR8749028 | MeJA induced 9h | 8.172 |
| SRR8749029 | MeJA induced 9h | 7.105 |
| SRR8749030 | Uninduced | 3.054 |
| SRR8749031 | Uninduced | 0.686 |
| SRR8749032 | Uninduced | 0.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.932 |
| SRR8400027 | Control - Root | 6.747 |