Gene detail information of Glyur000087s00008553 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34090.1 | 6.00E-128 | |
| NR | XP_003517309.1 | 0 | PREDICTED: uncharacterized protein LOC100800367 [Glycine max] |
| trEMBL | tr|I1J987|I1J987_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 165971 | 168784 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.344 |
| SRR1783600 | control | 5.421 |
| SRR1783602 | moderate drought stress | 11.632 |
| SRR1811619 | moderate drought stress | 8.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.485 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.745 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.806 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.765 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.712 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.952 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.903 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.225 |
| SRR2868004 | Drought Stress (root) | 13.665 |
| SRR2967015 | Control (root) | 14.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.344 |
| SRR9715740 | Leaf | 32.579 |
| SRR9715741 | Leaf | 18.106 |
| SRR9715739 | Root | 7.104 |
| SRR9715742 | Root | 3.822 |
| SRR9715743 | Root | 4.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.641 |
| SRR8749028 | MeJA induced 9h | 13.320 |
| SRR8749029 | MeJA induced 9h | 18.134 |
| SRR8749030 | Uninduced | 6.398 |
| SRR8749031 | Uninduced | 3.372 |
| SRR8749032 | Uninduced | 6.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.090 |
| SRR8400027 | Control - Root | 19.046 |