Gene detail information of Glyur000087s00008551 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67130.1 | 5.00E-172 | PLC-like phosphodiesterases superfamily protein |
| NR | XP_003538811.2 | 0 | PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Glycine max] |
| COG | YP_001869900.1 | 1.00E-19 | glycoside hydrolase family protein [Nostoc punctiforme PCC 73102] |
| Swissprot | tr|Q93XX5|Y5713_ARATH | 0 | PI-PLC X domain-containing protein At5g67130 (Precursor) |
| trEMBL | tr|I1LHC8|I1LHC8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G05770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 151281 | 155170 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.403 |
| SRR1783600 | control | 22.894 |
| SRR1783602 | moderate drought stress | 30.545 |
| SRR1811619 | moderate drought stress | 30.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.690 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.966 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.158 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.315 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.366 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.734 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.675 |
| SRR2868004 | Drought Stress (root) | 11.644 |
| SRR2967015 | Control (root) | 13.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.982 |
| SRR9715740 | Leaf | 4.602 |
| SRR9715741 | Leaf | 4.130 |
| SRR9715739 | Root | 13.952 |
| SRR9715742 | Root | 21.422 |
| SRR9715743 | Root | 19.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.637 |
| SRR8749028 | MeJA induced 9h | 3.838 |
| SRR8749029 | MeJA induced 9h | 4.712 |
| SRR8749030 | Uninduced | 1.170 |
| SRR8749031 | Uninduced | 2.679 |
| SRR8749032 | Uninduced | 4.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.322 |
| SRR8400027 | Control - Root | 32.498 |