Gene detail

Gene detail information of Glyur000087s00008546.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23420.1	0	nicotinate phosphoribosyltransferase 2
NR	XP_004511917.1	0	PREDICTED: nicotinate phosphoribosyltransferase-like [Cicer arietinum]
COG	YP_003089277.1	2.00E-117	nicotinate phosphoribosyltransferase [Dyadobacter fermentans DSM 18053]
trEMBL	tr\|I1J981\|I1J981_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G39440.1}

Sequence

Transcript Sequence

>Glyur000087s00008546.1
CAAAATCTTGACTCTTAAACTTTTTAGTAATTAATTATGTCAATGTTGATAAGGGAATTGAATCATCAATATCATCATGTGATGTGACTTAAAATATCATTTTTGATGGATTGTGGAAATTTGAAAAGAAGCAAATTGATATTGAAAAGCTATAACCCAAAATGATCCCCTGGTGTGATCAGGGAAGTATATCCAAACTTATAAGAGCAGAGACACGGTGGATGCGGATGTTGAGAATCGATCACGTGTGTGGAAAAGGTTACAGTCCACAGAGAATAGAGAGTATCAACAAAAAGTACCAACAGAGACCATTGCCAAATCCGACCTCGTTACAAAAACTTGGAAAAGAAAACCCTTGGTGTTTTTCATTTTTGTTTTGAATNCAGAGTGGAACGAACCGAACCAAACCAAACCAATCTCGTTTTGTTTATCTTTCTCTCTCTATATATAAATTCAGTTTTTTCATGCAAACGCCCTTCACTCGAAGCTCTGATTGTGCGCGCGTGACACTCACGCTTGCTTCACACTTTCGAGACTTCGTTCCTTGTATAGCAGAGCCTACTTCGACGAAAAAATGGAGTCAAATGGTTCGAACGAGCAACATCCGGGTCGGGGCATAGCTGGACCCACCAACCCAATGGTCACGCCTCTGCTCACGGATCTCTATCAATTCACCATGGCTTACGCATATTGGAAAGCTGGCAAGCATCAAGAACGTGCTGTGTTCGATTTGTATTTTCGGAAGAATCCATTTGGCGGGGAGTACACTATCTTCGCTGGTTTGGAAGAATGCGTAAGGTTTATTGCTAATTACAAGCTCTCTGCGGAAGAGATTGATTTTATCAAGAAGAATTTGCCTGTTTCATGTGAGGATGGTTTCTTTGACTATCTTAGAGGAATTGACTGTTCTGACGTTGAGATATATGCTATTCCCGAAGGATCTGTTGTTTTTCCTAAGGTGCCCCTGTTGAGAGTTGAAGGTCCAATTGCTGTTGTTCAATTGCTGGAAACACCTTTTGTCAATCTAATTAACTTTGCATCATTAGTTACTACTAATGCTGCAAGGCACCGTTTTGTTGCTGGAAAATCGAAAACTTTACTTGAGTTTGGACTACGAAGGGCTCAGGGGCCTGATGGTGGAGTAGGTGCATCAAAGTACTGTTATATTGGAGGATTTGATGCAACAAGCAATGTTGCAGCAGGAAGGTTATTCGGGATTCCCCTTCGTGGCACTCATTCCCATGCCTTTGTTAGCTCATATATGAGCCTTAATGAGATTACCAACAAATCACTGCGTAAAAAAGATGGTTCAAGTACATGCGAAGATTTTGTTAGTTTGATTCAAAAATGGCTGAGAAAAATTAAGTGGTCAAATTCATTACGTGACATTTTTGCTGAGACTAATCAAAGTGAGCTGGCAGCATTCACATCATATGCATTGGCATTTCCTGATAACTTTCTTGCCCTTGTAGACACTTATGATGTGATGAGAAGTGGAATTCCTAACTTCTGTGCAGTTGCATTAGCTCTCAGTGATTTAGGATACAAAGCAGTCGGAATTAGACTGGACTCTGGTGACCTTGCATATTTGTCTTGTGAAGCCAGGAAGTTCTTTTGTTCCATCGAGAAGGAATTTGGATTGCCTGGTTTCGGGAAGATGAGTATCACAGCTAGTAATGACCTTAATGAGGAAACGTTAGATGCTTTAAATAAACAGGGTCACGAGGTTGATGCCTATGGAATTGGGACAAACCTAGTTACATGTTATGCTCAAGCAGCTTTAGGTGTTGTTTTCAAGTTGGTTGAGATAAACAATAAGCCCCGTATCAAACTTTCTGAAGATGTCTCAAAGGTCTCTATTCCATGTAAGAAGCGAATTTTTAGATTGTATGGCAGAGAAGGTTACGCCTTGGTAGACATAATGACTGGGGAAAATGAACCCCCTCCAAAGAGAGCACATGTGGTGCCACAGCATGTTGAGGAGCTTCTAAGATGTTATTGTGCGGGGGGTTCAGATAAAAAGAGAGAAACTTTACCACCTTTGAAAGACATAAGAGAGCGATGCATCAAGCAACTTGAANAAATGCGACCTGACCACATGAGGAGACTTAATCCAACTCCGTACAAGGTTAGTGTAAGCAGAGAGTTATACGACTTCATTCATGGCTTGTGGCTCAATGAGGCACCTGTCGGGGAGCTACAGTGACAAGGGAAATAAGACGGCATGCCTCTTAATGATCGGGGCTAAAAAGATTGCAATAGAAGTTTCTTTTTTAGACCAGCTATAGTCAGCGTATACATGTATTCATAATGTTCTCAAATTATATGCTTATGTATATTATGTTCGAGTAACCATTATTCTTTCAAGAATTATGCGCAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00087	110376	118153	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00763	pncB, NAPRT1	EC:6.3.4.21	Nicotinate and nicotinamide metabolism	map00760
			Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

biological_process

GO:0009435 NAD biosynthetic process

GO:0019358 nicotinate nucleotide salvage

molecular_function

GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity

GO:0004516 nicotinate phosphoribosyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000087s00008546.1	PF04095.11	NAPRTase	175	279	1.80E-13
Glyur000087s00008546.1	PF04095.11	NAPRTase	281	437	6.60E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.205
SRR1783600	control	3.356
SRR1783602	moderate drought stress	4.025
SRR1811619	moderate drought stress	4.169

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.566
DRR006520	Root Summer glycyrrhizin high producing strain	6.725
DRR006521	Root Winter glycyrrhizin high producing strain	6.073
DRR006522	Root Winter glycyrrhizin high producing strain	5.990
DRR006523	Root Summer glycyrrhizin low producing strain	5.149
DRR006524	Root Summer glycyrrhizin low producing strain	4.964
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.658
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.542

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.623
SRR2868004	Drought Stress (root)	11.971
SRR2967015	Control (root)	14.805

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.393
SRR9715740	Leaf	3.791
SRR9715741	Leaf	3.633
SRR9715739	Root	1.351
SRR9715742	Root	3.411
SRR9715743	Root	3.203

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.888
SRR8749028	MeJA induced 9h	4.917
SRR8749029	MeJA induced 9h	3.136
SRR8749030	Uninduced	10.348
SRR8749031	Uninduced	4.642
SRR8749032	Uninduced	5.310

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.976
SRR8400027	Control - Root	5.999