Gene detail information of Glyur000087s00008539 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67070.1 | 9.00E-35 | ralf-like 34 |
| NR | XP_004511922.1 | 1.78E-58 | PREDICTED: protein RALF-like 34-like [Cicer arietinum] |
| Swissprot | tr|Q9FHA6|RLF34_ARATH | 1.00E-43 | Protein RALF-like 34 (Precursor) |
| trEMBL | tr|I1J975|I1J975_SOYBN | 7.00E-54 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 66042 | 66576 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000087s00008539.1 | PF05498.6 | RALF | 63 | 131 | 7.90E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 538.853 |
| SRR1783600 | control | 535.734 |
| SRR1783602 | moderate drought stress | 228.178 |
| SRR1811619 | moderate drought stress | 225.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 372.028 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 365.435 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.927 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.839 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 237.804 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 235.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.603 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 181.436 |
| SRR2868004 | Drought Stress (root) | 67.530 |
| SRR2967015 | Control (root) | 87.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 88.273 |
| SRR9715740 | Leaf | 25.201 |
| SRR9715741 | Leaf | 34.276 |
| SRR9715739 | Root | 317.019 |
| SRR9715742 | Root | 163.147 |
| SRR9715743 | Root | 189.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 196.299 |
| SRR8749028 | MeJA induced 9h | 62.403 |
| SRR8749029 | MeJA induced 9h | 117.132 |
| SRR8749030 | Uninduced | 20.187 |
| SRR8749031 | Uninduced | 3.039 |
| SRR8749032 | Uninduced | 12.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 315.554 |
| SRR8400027 | Control - Root | 393.828 |