Gene detail information of Glyur000087s00008536 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42930.1 | 6.00E-63 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004511925.1 | 6.96E-132 | PREDICTED: uncharacterized protein LOC101491507 [Cicer arietinum] |
| trEMBL | tr|G7K6N4|G7K6N4_MEDTR | 2.00E-128 | Triacylglycerol lipase-like protein {ECO:0000313|EMBL:AES94691.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 29996 | 35162 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000087s00008536.1 | PF01764.20 | Lipase_3 | 99 | 201 | 1.60E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 98.316 |
| SRR1783600 | control | 96.901 |
| SRR1783602 | moderate drought stress | 177.429 |
| SRR1811619 | moderate drought stress | 176.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.948 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.320 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.073 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.975 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.128 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.904 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.478 |
| SRR2868004 | Drought Stress (root) | 26.994 |
| SRR2967015 | Control (root) | 17.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.388 |
| SRR9715740 | Leaf | 0.732 |
| SRR9715741 | Leaf | 2.511 |
| SRR9715739 | Root | 17.408 |
| SRR9715742 | Root | 55.929 |
| SRR9715743 | Root | 47.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.054 |
| SRR8749028 | MeJA induced 9h | 0.294 |
| SRR8749029 | MeJA induced 9h | 0.046 |
| SRR8749030 | Uninduced | 0.240 |
| SRR8749031 | Uninduced | 0.202 |
| SRR8749032 | Uninduced | 1.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.561 |
| SRR8400027 | Control - Root | 13.479 |