Gene detail information of Glyur000087s00008534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G45207.2 | 8.00E-36 | Remorin family protein |
| NR | KHN36229.1 | 0 | hypothetical protein glysoja_003352 [Glycine soja] |
| trEMBL | tr|I1J970|I1J970_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 19418 | 22792 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000087s00008534.1 | PF03763.8 | Remorin_C | 319 | 411 | 3.20E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.331 |
| SRR1783600 | control | 6.336 |
| SRR1783602 | moderate drought stress | 18.733 |
| SRR1811619 | moderate drought stress | 18.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.308 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.331 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.243 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.021 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.621 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.331 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.477 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.520 |
| SRR2868004 | Drought Stress (root) | 0.285 |
| SRR2967015 | Control (root) | 1.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.804 |
| SRR9715740 | Leaf | 17.142 |
| SRR9715741 | Leaf | 6.981 |
| SRR9715739 | Root | 0.325 |
| SRR9715742 | Root | 1.301 |
| SRR9715743 | Root | 0.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.153 |
| SRR8749028 | MeJA induced 9h | 0.035 |
| SRR8749029 | MeJA induced 9h | 0.197 |
| SRR8749030 | Uninduced | 0.272 |
| SRR8749031 | Uninduced | 0.073 |
| SRR8749032 | Uninduced | 0.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.981 |
| SRR8400027 | Control - Root | 2.057 |