Gene detail information of Glyur000086s00011540 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29120.2 | 3.00E-113 | Hydrolase-like protein family |
| NR | KEH36582.1 | 0 | alpha/beta-hydrolase superfamily protein [Medicago truncatula] |
| trEMBL | tr|A0A072V404|A0A072V404_MEDTR | 0 | Alpha/beta-hydrolase superfamily protein {ECO:0000313|EMBL:KEH36582.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00086 | 300171 | 306175 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000086s00011540.1 | PF05057.9 | DUF676 | 79 | 317 | 5.70E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.738 |
| SRR1783600 | control | 6.856 |
| SRR1783602 | moderate drought stress | 8.018 |
| SRR1811619 | moderate drought stress | 8.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.844 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.721 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.666 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.167 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.599 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.387 |
| SRR2868004 | Drought Stress (root) | 13.864 |
| SRR2967015 | Control (root) | 13.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.854 |
| SRR9715740 | Leaf | 25.673 |
| SRR9715741 | Leaf | 33.239 |
| SRR9715739 | Root | 1.658 |
| SRR9715742 | Root | 5.228 |
| SRR9715743 | Root | 4.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.496 |
| SRR8749028 | MeJA induced 9h | 29.418 |
| SRR8749029 | MeJA induced 9h | 16.577 |
| SRR8749030 | Uninduced | 40.473 |
| SRR8749031 | Uninduced | 23.865 |
| SRR8749032 | Uninduced | 18.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.020 |
| SRR8400027 | Control - Root | 17.411 |