Gene detail information of Glyur000086s00011539 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42590.2 | 7.00E-119 | general regulatory factor 9 |
| NR | BAB17822.1 | 1.85E-170 | vf14-3-3d protein [Vicia faba] |
| Swissprot | tr|Q96452|1433C_SOYBN | 2.00E-161 | 14-3-3-like protein C |
| trEMBL | tr|Q9FXL1|Q9FXL1_VICFA | 7.00E-171 | Vf14-3-3d protein {ECO:0000313|EMBL:BAB17822.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00086 | 292814 | 296403 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000086s00011539.1 | PF00244.15 | 2014/3/3 | 7 | 240 | 3.40E-115 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.632 |
| SRR1783600 | control | 31.562 |
| SRR1783602 | moderate drought stress | 21.726 |
| SRR1811619 | moderate drought stress | 21.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.993 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 51.361 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.164 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.252 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.157 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 86.547 |
| SRR2868004 | Drought Stress (root) | 77.198 |
| SRR2967015 | Control (root) | 67.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.908 |
| SRR9715740 | Leaf | 25.059 |
| SRR9715741 | Leaf | 24.716 |
| SRR9715739 | Root | 45.925 |
| SRR9715742 | Root | 39.939 |
| SRR9715743 | Root | 43.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 156.376 |
| SRR8749028 | MeJA induced 9h | 98.989 |
| SRR8749029 | MeJA induced 9h | 94.754 |
| SRR8749030 | Uninduced | 52.200 |
| SRR8749031 | Uninduced | 33.211 |
| SRR8749032 | Uninduced | 32.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 66.573 |
| SRR8400027 | Control - Root | 67.656 |