Gene detail

Gene detail information of Glyur000086s00011538

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G01070.1	3.00E-81	UDP-Glycosyltransferase superfamily protein
NR	XP_002281768.1	9.91E-166	PREDICTED: anthocyanidin 3-O-glucosyltransferase 5 [Vitis vinifera]
Swissprot	tr\|Q40287\|UFOG5_MANES	2.00E-113	Anthocyanidin 3-O-glucosyltransferase 5
trEMBL	tr\|E0CQ07\|E0CQ07_VITVI	4.00E-166	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI19653.3}

Sequence

Transcript Sequence

>Glyur000086s00011538.1
ATGGTGGTGGCCGCTGCTGGAGTTGAGGTTAATGTTGAAGCTGAAGCTGCCTCCAATTCCAAACCTCACGTGGCGGTTCTGCCTTGTCCAGGGATGGGTCACGTGATACCCATGCTTGAGCTGGCGAAGCGCCTCGTCCTCCACCACGCCTGTCACGTGACCTTCCTCCACATCACCACCGAAGCTTCCCCCACCCAGTCCCGCCTCCTCCACTCCACCAACCTCCCCACCGACCTCTCCGTCGTCCACCTCCCACCCACCGACCTCTCTGCCNTCATATCCGACGACACTCCCGTCCTCTCCCACCTCTGCCTCAACGTCCGCGAAAGCCTCCGATCCCTGAAATCCACCCTCACGAAACTCCCACTCCCCAAACCCCAAGCCNTAATCATCGACGTGTTTTGCTCCCAAGCCTTCGACACCTGCACGGAACTCTCCATCCCCGCCTACGTCTTCGCCACCACCTCCACCACGTTCCTCGCCTTCTCCCTGCTTTTNCGGAACCTCGACGGCGATGTCTCCGGCGAGTTCCTCGACCTTCCCGGTTGCAACCCGCTCAGAACGGAGGACCTCCCGCTCGTCACCAACGGCGACGAGAAATGGTTCTCTTACCACCTCTGCCGGTTGCCCATGGCCACTGGGATCTTCATTAACACCTACGAGGATCTCGAACCGCTTCCCATACGAGCCGTTAGAGAAAACCCCTTCTACAACCGGATACCGACTCCGCCGGTTTACCCAATTGGACCGTTAGTGATAGAAACCGAACCGGTTACCGGAACGGGAAAAGAATGCCTGGCTTGGCTCGATAAACAGGCTTCGGGGTCTGTTCTGTTTGTGGCGCTGGGGAGTGGGGGGAATCTGTGCGCGGAGCAACTCACTGAGTTGGCGTGGGGTTTGGAACTGAGTCAGCAGCGATTCCTGTGGGTTGTGCGTACCCCAACTGATGTTAGTGGAATCAACACTTATTTCAATGTGGGTGAGGACGTGAATGANCCGAAATCGTATCTGCCGGAGGGGTTTATGGAGAGGGCGAAGGAATTGGGGATGGTGGTGCCGTCGTGGGCCCCGCAGGTATCGGTGCTGAGTCACGAGTCGACGGGGGCGTTTCTGTCACACTGCGGGTGGAACTCGGTGTTGGAGAGCGTGAGTCACGGCGTGCCCGTGATAACGTGGCCTCTGTACTGCGATCAGATGATGAACGCGACGCTGCTGGCGGAGGAGATGGGCGTGCAATTAAGCCGGCGGCGGAGGAGCCCGGGAGGCGGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00086	290900	292171	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000086s00011538.1	PF00201.13	UDPGT	263	408	1.10E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.716
SRR1783600	control	0.752
SRR1783602	moderate drought stress	0.317
SRR1811619	moderate drought stress	0.377

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.809
DRR006520	Root Summer glycyrrhizin high producing strain	0.967
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.778
DRR006524	Root Summer glycyrrhizin low producing strain	0.780
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.110
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.072

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.258
SRR2868004	Drought Stress (root)	9.007
SRR2967015	Control (root)	12.773

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.013
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.051
SRR9715739	Root	1.014
SRR9715742	Root	0.904
SRR9715743	Root	1.090

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.112
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.050
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.104

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.581
SRR8400027	Control - Root	5.574