Gene detail information of Glyur000086s00011531 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29195.1 | 1.00E-22 | |
| NR | XP_004485896.1 | 5.13E-56 | PREDICTED: probable phosphatidylinositol 4-phosphate 5-kinase MSS4-like [Cicer arietinum] |
| trEMBL | tr|V7BSL9|V7BSL9_PHAVU | 5.00E-55 | Uncharacterized protein {ECO:0000313|EMBL:ESW20040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00086 | 222611 | 224000 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000086s00011531.1 | PF14009.1 | DUF4228 | 1 | 132 | 6.10E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.190 |
| SRR1783600 | control | 4.085 |
| SRR1783602 | moderate drought stress | 11.800 |
| SRR1811619 | moderate drought stress | 11.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.891 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.844 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.468 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 73.454 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.814 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.253 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.991 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.928 |
| SRR2868004 | Drought Stress (root) | 10.951 |
| SRR2967015 | Control (root) | 11.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.222 |
| SRR9715740 | Leaf | 3.660 |
| SRR9715741 | Leaf | 3.919 |
| SRR9715739 | Root | 3.982 |
| SRR9715742 | Root | 4.789 |
| SRR9715743 | Root | 4.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.443 |
| SRR8749028 | MeJA induced 9h | 21.445 |
| SRR8749029 | MeJA induced 9h | 24.811 |
| SRR8749030 | Uninduced | 3.686 |
| SRR8749031 | Uninduced | 1.309 |
| SRR8749032 | Uninduced | 12.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.885 |
| SRR8400027 | Control - Root | 7.217 |