Gene detail information of Glyur000086s00011524 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29240.1 | 1.00E-37 | Protein of unknown function (DUF688) |
| NR | XP_004485899.1 | 0 | PREDICTED: uncharacterized protein LOC101504403 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1MES9|I1MES9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00086 | 175947 | 180043 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000086s00011524.1 | PF05097.7 | DUF688 | 1 | 492 | 2.20E-86 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.030 |
| SRR1783600 | control | 26.043 |
| SRR1783602 | moderate drought stress | 19.883 |
| SRR1811619 | moderate drought stress | 19.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.841 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.236 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.434 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.253 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.892 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.353 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.934 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.323 |
| SRR2868004 | Drought Stress (root) | 35.146 |
| SRR2967015 | Control (root) | 32.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.374 |
| SRR9715740 | Leaf | 5.410 |
| SRR9715741 | Leaf | 22.383 |
| SRR9715739 | Root | 3.962 |
| SRR9715742 | Root | 29.054 |
| SRR9715743 | Root | 23.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.995 |
| SRR8749028 | MeJA induced 9h | 19.507 |
| SRR8749029 | MeJA induced 9h | 4.109 |
| SRR8749030 | Uninduced | 7.565 |
| SRR8749031 | Uninduced | 0.712 |
| SRR8749032 | Uninduced | 0.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.230 |
| SRR8400027 | Control - Root | 40.261 |