Gene detail information of Glyur000086s00011491 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42760.1 | 6.00E-26 | |
| NR | XP_004485927.1 | 1.16E-99 | PREDICTED: uncharacterized protein LOC101512973 [Cicer arietinum] |
| trEMBL | tr|A0A072V475|A0A072V475_MEDTR | 1.00E-98 | DUF1685 family protein {ECO:0000313|EMBL:KEH36642.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00086 | 22137 | 22892 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000086s00011491.1 | PF07939.6 | DUF1685 | 142 | 175 | 4.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.623 |
| SRR1783600 | control | 0.635 |
| SRR1783602 | moderate drought stress | 1.163 |
| SRR1811619 | moderate drought stress | 1.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.911 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.120 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.148 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.144 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.844 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.862 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.833 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.474 |
| SRR2868004 | Drought Stress (root) | 49.494 |
| SRR2967015 | Control (root) | 44.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 142.413 |
| SRR9715740 | Leaf | 67.791 |
| SRR9715741 | Leaf | 180.449 |
| SRR9715739 | Root | 1.224 |
| SRR9715742 | Root | 35.679 |
| SRR9715743 | Root | 32.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.250 |
| SRR8749028 | MeJA induced 9h | 28.719 |
| SRR8749029 | MeJA induced 9h | 19.795 |
| SRR8749030 | Uninduced | 22.890 |
| SRR8749031 | Uninduced | 33.600 |
| SRR8749032 | Uninduced | 15.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.060 |
| SRR8400027 | Control - Root | 31.453 |