Gene detail information of Glyur000085s00008886 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02750.2 | 4.00E-164 | Protein phosphatase 2C family protein |
| NR | XP_003552448.1 | 0 | PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] |
| Swissprot | tr|Q9M8R7|P2C33_ARATH | 0 | Probable protein phosphatase 2C 33 |
| trEMBL | tr|I1N3Z6|I1N3Z6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G47810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 308199 | 312804 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000085s00008886.1 | PF00481.16 | PP2C | 111 | 361 | 5.00E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.984 |
| SRR1783600 | control | 30.359 |
| SRR1783602 | moderate drought stress | 25.696 |
| SRR1811619 | moderate drought stress | 25.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.527 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.507 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.569 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.659 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.805 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.533 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.518 |
| SRR2868004 | Drought Stress (root) | 44.947 |
| SRR2967015 | Control (root) | 46.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.076 |
| SRR9715740 | Leaf | 83.184 |
| SRR9715741 | Leaf | 64.110 |
| SRR9715739 | Root | 30.550 |
| SRR9715742 | Root | 55.795 |
| SRR9715743 | Root | 51.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.638 |
| SRR8749028 | MeJA induced 9h | 6.729 |
| SRR8749029 | MeJA induced 9h | 4.303 |
| SRR8749030 | Uninduced | 29.060 |
| SRR8749031 | Uninduced | 9.552 |
| SRR8749032 | Uninduced | 5.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.752 |
| SRR8400027 | Control - Root | 47.821 |