Gene detail information of Glyur000085s00008884 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65230.1 | 7.00E-93 | Uncharacterized conserved protein (DUF2358) |
| NR | AFK49033.1 | 8.92E-166 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T941|I3T941_LOTJA | 3.00E-166 | Uncharacterized protein {ECO:0000313|EMBL:AFK49033.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 290941 | 293843 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000085s00008884.1 | PF10184.4 | DUF2358 | 106 | 195 | 4.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.351 |
| SRR1783600 | control | 0.418 |
| SRR1783602 | moderate drought stress | 1.437 |
| SRR1811619 | moderate drought stress | 1.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.128 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.136 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.059 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.052 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.477 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 54.017 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.171 |
| SRR2868004 | Drought Stress (root) | 11.449 |
| SRR2967015 | Control (root) | 11.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 106.256 |
| SRR9715740 | Leaf | 178.307 |
| SRR9715741 | Leaf | 132.062 |
| SRR9715739 | Root | 0.985 |
| SRR9715742 | Root | 0.798 |
| SRR9715743 | Root | 1.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.348 |
| SRR8749028 | MeJA induced 9h | 2.967 |
| SRR8749029 | MeJA induced 9h | 2.477 |
| SRR8749030 | Uninduced | 8.250 |
| SRR8749031 | Uninduced | 8.247 |
| SRR8749032 | Uninduced | 5.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.761 |
| SRR8400027 | Control - Root | 2.516 |