Gene detail information of Glyur000085s00008880


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G16400.12.00E-52thioredoxin F2
NRXP_003624192.12.86E-86Thioredoxin [Medicago truncatula]
COGYP_006379602.13.00E-14thioredoxin 2 [Advenella kashmirensis WT001]
Swissprottr|P29450|TRXF_PEA9.00E-78Thioredoxin F-type, chloroplastic (Precursor)
trEMBLtr|G7KRK1|G7KRK1_MEDTR1.00E-86Thioredoxin {ECO:0000313|EMBL:AES80410.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00085262599265575-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006662  glycerol ether metabolic process

GO:0045454  cell redox homeostasis


molecular_function

GO:0015035  protein disulfide oxidoreductase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000085s00008880.1PF00085.15Thioredoxin831821.40E-27
Glyur000085s00008880.2PF00085.15Thioredoxin831431.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.698
SRR1783600control26.589
SRR1783602moderate drought stress33.304
SRR1811619moderate drought stress32.703

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.597
DRR006520Root Summer glycyrrhizin high producing strain19.753
DRR006521Root Winter glycyrrhizin high producing strain21.993
DRR006522Root Winter glycyrrhizin high producing strain17.363
DRR006523Root Summer glycyrrhizin low producing strain16.298
DRR006524Root Summer glycyrrhizin low producing strain17.345
DRR006525Leaf Summer glycyrrhizin high producing strain515.920
DRR006526Leaf Summer glycyrrhizin high producing strain511.716

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)37.177
SRR2868004Drought Stress (root)47.101
SRR2967015Control (root)31.710

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf446.038
SRR9715740Leaf547.141
SRR9715741Leaf430.205
SRR9715739Root28.944
SRR9715742Root26.786
SRR9715743Root26.731

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.129
SRR8749028MeJA induced 9h13.292
SRR8749029MeJA induced 9h16.220
SRR8749030Uninduced6.592
SRR8749031Uninduced2.836
SRR8749032Uninduced5.409

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root39.812
SRR8400027Control - Root38.611

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved