Gene detail information of Glyur000085s00008878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07470.1 | 1.00E-43 | Protein of unknown function, DUF538 |
| NR | XP_004492851.1 | 2.17E-85 | PREDICTED: uncharacterized protein LOC101512804 [Cicer arietinum] |
| trEMBL | tr|V7B4B9|V7B4B9_PHAVU | 1.00E-81 | Uncharacterized protein {ECO:0000313|EMBL:ESW11708.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 252301 | 252993 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000085s00008878.1 | PF04398.7 | DUF538 | 37 | 147 | 1.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.376 |
| SRR1783600 | control | 28.575 |
| SRR1783602 | moderate drought stress | 31.504 |
| SRR1811619 | moderate drought stress | 31.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.088 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.854 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 200.142 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 192.937 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 66.401 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 65.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.006 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 70.271 |
| SRR2868004 | Drought Stress (root) | 84.890 |
| SRR2967015 | Control (root) | 85.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.681 |
| SRR9715740 | Leaf | 27.252 |
| SRR9715741 | Leaf | 24.065 |
| SRR9715739 | Root | 55.355 |
| SRR9715742 | Root | 45.084 |
| SRR9715743 | Root | 43.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.665 |
| SRR8749028 | MeJA induced 9h | 17.987 |
| SRR8749029 | MeJA induced 9h | 11.384 |
| SRR8749030 | Uninduced | 8.372 |
| SRR8749031 | Uninduced | 5.751 |
| SRR8749032 | Uninduced | 8.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.346 |
| SRR8400027 | Control - Root | 68.437 |