Gene detail information of Glyur000085s00008867 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03305.1 | 0 | Calcineurin-like metallo-phosphoesterase superfamily protein |
| NR | XP_003624215.1 | 0 | Transmembrane protein [Medicago truncatula] |
| Swissprot | tr|Q0WVZ1|Y3330_ARATH | 0 | Putative metallophosphoesterase At3g03305 (Precursor) |
| trEMBL | tr|G7KSE4|G7KSE4_MEDTR | 0 | Calcineurin-like metallo-phosphoesterase superfamily protein {ECO:0000313|EMBL:AES80433.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 173932 | 178206 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000085s00008867.1 | PF00149.23 | Metallophos | 64 | 280 | 2.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.221 |
| SRR1783600 | control | 7.128 |
| SRR1783602 | moderate drought stress | 6.090 |
| SRR1811619 | moderate drought stress | 6.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.049 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.867 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.641 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.617 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.645 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.055 |
| SRR2868004 | Drought Stress (root) | 11.781 |
| SRR2967015 | Control (root) | 11.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.396 |
| SRR9715740 | Leaf | 7.562 |
| SRR9715741 | Leaf | 9.517 |
| SRR9715739 | Root | 3.716 |
| SRR9715742 | Root | 10.081 |
| SRR9715743 | Root | 9.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.074 |
| SRR8749028 | MeJA induced 9h | 10.234 |
| SRR8749029 | MeJA induced 9h | 9.222 |
| SRR8749030 | Uninduced | 8.170 |
| SRR8749031 | Uninduced | 5.434 |
| SRR8749032 | Uninduced | 3.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.882 |
| SRR8400027 | Control - Root | 12.881 |