Gene detail information of Glyur000085s00008855 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60200.1 | 4.00E-30 | |
| NR | XP_006587797.1 | 1.52E-145 | PREDICTED: uncharacterized protein LOC102667071 [Glycine max] |
| trEMBL | tr|I1L670|I1L670_SOYBN | 6.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G38280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 112961 | 113896 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.925 |
| SRR1783600 | control | 9.915 |
| SRR1783602 | moderate drought stress | 11.368 |
| SRR1811619 | moderate drought stress | 11.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.399 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.632 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.175 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.559 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.124 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.749 |
| SRR2868004 | Drought Stress (root) | 26.041 |
| SRR2967015 | Control (root) | 20.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.819 |
| SRR9715740 | Leaf | 10.447 |
| SRR9715741 | Leaf | 19.275 |
| SRR9715739 | Root | 21.841 |
| SRR9715742 | Root | 23.155 |
| SRR9715743 | Root | 20.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.082 |
| SRR8749028 | MeJA induced 9h | 4.045 |
| SRR8749029 | MeJA induced 9h | 2.892 |
| SRR8749030 | Uninduced | 2.161 |
| SRR8749031 | Uninduced | 0.621 |
| SRR8749032 | Uninduced | 1.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.454 |
| SRR8400027 | Control - Root | 16.403 |