Gene detail information of Glyur000085s00008852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22750.2 | 3.00E-08 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004492885.1 | 1.33E-49 | PREDICTED: transcription factor bHLH25-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q1PF17|BH018_ARATH | 1.00E-08 | Transcription factor bHLH18 |
| trEMBL | tr|G7KSG4|G7KSG4_MEDTR | 5.00E-49 | Helix loop helix DNA-binding domain protein {ECO:0000313|EMBL:AES80453.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 91772 | 92719 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.213 |
| SRR1783600 | control | 58.613 |
| SRR1783602 | moderate drought stress | 46.472 |
| SRR1811619 | moderate drought stress | 45.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.095 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.718 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.397 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.824 |
| SRR2868004 | Drought Stress (root) | 17.908 |
| SRR2967015 | Control (root) | 14.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.308 |
| SRR9715740 | Leaf | 1.452 |
| SRR9715741 | Leaf | 1.907 |
| SRR9715739 | Root | 1.255 |
| SRR9715742 | Root | 17.037 |
| SRR9715743 | Root | 17.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.086 |
| SRR8749032 | Uninduced | 0.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.357 |
| SRR8400027 | Control - Root | 9.889 |