Gene detail information of Glyur000085s00008850 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15095.1 | 2.00E-31 | |
| NR | KEH38665.1 | 1.02E-180 | hypothetical protein MTR_2g078530 [Medicago truncatula] |
| Swissprot | tr|Q1PF16|BH019_ARATH | 2.00E-14 | Transcription factor bHLH19 |
| trEMBL | tr|A0A072VKI2|A0A072VKI2_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH38665.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 85113 | 87871 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.491 |
| SRR1783600 | control | 12.875 |
| SRR1783602 | moderate drought stress | 11.088 |
| SRR1811619 | moderate drought stress | 10.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.323 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.160 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.028 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.297 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.892 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.033 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.170 |
| SRR2868004 | Drought Stress (root) | 12.928 |
| SRR2967015 | Control (root) | 15.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.662 |
| SRR9715740 | Leaf | 0.502 |
| SRR9715741 | Leaf | 0.669 |
| SRR9715739 | Root | 0.492 |
| SRR9715742 | Root | 3.549 |
| SRR9715743 | Root | 3.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.590 |
| SRR8749028 | MeJA induced 9h | 2.167 |
| SRR8749029 | MeJA induced 9h | 3.233 |
| SRR8749030 | Uninduced | 0.032 |
| SRR8749031 | Uninduced | 0.080 |
| SRR8749032 | Uninduced | 0.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.655 |
| SRR8400027 | Control - Root | 9.165 |