Gene detail information of Glyur000085s00008834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003623935.1 | 3.46E-41 | Bowman-Birk type proteinase inhibitor [Medicago truncatula] |
| Swissprot | tr|Q41066|IBB2_PEA | 1.00E-37 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|A4PIB8|A4PIB8_9FABA | 1.00E-41 | Trypsin inhibitor {ECO:0000313|EMBL:BAF50740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 8354 | 9544 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000085s00008834.1 | PF00228.15 | Bowman-Birk_leg | 98 | 122 | 7.50E-07 |
| Glyur000085s00008834.1 | PF00228.15 | Bowman-Birk_leg | 124 | 148 | 1.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.631 |
| SRR1783600 | control | 3.180 |
| SRR1783602 | moderate drought stress | 9.799 |
| SRR1811619 | moderate drought stress | 6.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.934 |
| SRR2868004 | Drought Stress (root) | 79.895 |
| SRR2967015 | Control (root) | 94.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.094 |
| SRR9715740 | Leaf | 2.383 |
| SRR9715741 | Leaf | 21.217 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.776 |
| SRR9715743 | Root | 0.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.035 |
| SRR8749028 | MeJA induced 9h | 6.663 |
| SRR8749029 | MeJA induced 9h | 2.210 |
| SRR8749030 | Uninduced | 41.775 |
| SRR8749031 | Uninduced | 48.929 |
| SRR8749032 | Uninduced | 29.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.005 |
| SRR8400027 | Control - Root | 2.664 |