Gene detail information of Glyur000084s00009537 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48960.1 | 1.00E-43 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_003525644.1 | 1.54E-100 | PREDICTED: uncharacterized protein LOC100801011 [Glycine max] |
| trEMBL | tr|K7KNH0|K7KNH0_SOYBN | 6.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G07855.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00084 | 357723 | 359737 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000084s00009537.1 | PF00582.21 | Usp | 4 | 122 | 2.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.937 |
| SRR1783600 | control | 5.962 |
| SRR1783602 | moderate drought stress | 4.279 |
| SRR1811619 | moderate drought stress | 4.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.128 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.171 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.178 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.708 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.671 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.145 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.203 |
| SRR2868004 | Drought Stress (root) | 37.071 |
| SRR2967015 | Control (root) | 31.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.517 |
| SRR9715740 | Leaf | 0.399 |
| SRR9715741 | Leaf | 0.729 |
| SRR9715739 | Root | 1.383 |
| SRR9715742 | Root | 3.308 |
| SRR9715743 | Root | 2.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.702 |
| SRR8749028 | MeJA induced 9h | 17.351 |
| SRR8749029 | MeJA induced 9h | 9.154 |
| SRR8749030 | Uninduced | 24.211 |
| SRR8749031 | Uninduced | 13.579 |
| SRR8749032 | Uninduced | 4.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.147 |
| SRR8400027 | Control - Root | 11.616 |