Gene detail

Gene detail information of Glyur000084s00009529

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G18550.1	0	ATP binding microtubule motor family protein
NR	XP_007155167.1	0	hypothetical protein PHAVU_003G179100g [Phaseolus vulgaris]
Swissprot	tr\|P46869\|FLA10_CHLRE	1.00E-58	Kinesin-like protein FLA10
trEMBL	tr\|V7CE68\|V7CE68_PHAVU	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000084s00009529.1
CACAACACTAGACTCCTCTGTCTTCTTCTTCTTCTTCCTCTAGCTGAGCTTCTCCTCTGTTTGGATCCTGCGAATAAGGGTCATGTTTGGATGATAGCAAAGAATAACCGAAGAATAACAGAATGCCGGTTTCAACACGGTCTCAGGCCATCGAAAACGAAGCAGCAGCAACAGTGCAGAGGCTGAGAAACCCGCACCATGGCCTCAAAGAGAAGCTCAAAACCCTCACTCTCTTATACGAACAGCAGAAACAAGCCTCTGCAGCTCTCAAAAACAGNAACAACACCGTGATGCGGGAGAACACAATGCCAATGCCCAACTCAACCGTCACCAGAACCTTCGTCTTGCCNCAACCACCTTCCGTCAATGACGAAGACGCCAAGGAAAACCAAAACCTNGCCGCCGTCGGTTCCGATCGAATCGTCGGGTTCTCCTGCCCGAGAAAGGTCACGACAGCGACGGCAACAGCGACGGCGGCGACATCGGTNTCGAGTTCAGCCACGGTTGCTCGGAAACTGTCGATGGAGTCGTCGGCGGCGGGGAAGATTGGGAGCCGGATTCAGGTGTTCGTGAGGCTTAGACCAATGAGTAAGAAGGAAAGGGAAGCGGGTTCACGGTGCTGCGTGAGAATCGTGAATCGCCGTGACGTTTATCTAACGGAGTTTGCCAACGAGAACGATTACCTCAGGCTCAATAGGGTTAAGGGACGTTATTTCACCTTCGACGCTTCCTTTCCTGATTCCGCCACCCAGCATGAAGTCTATTCCATNACAACGTCGGAACTTGTGGAAGCGGTTCTGCAAGGAAGGAATGGGTCGGTTTTCTGTTACGGTGCTACCGGAGCTGGGAAAACCTACACAATGCTTGGCACGGTGGAGAATCCAGGGGTGATGGTTTTGGCAATTAAGGATCTCTTCAGTAAAATCAGACACAGAAGTTGTGATGGGAGCCATGTGGTTCATCTTTCCTACCTTGAGGTTTACAATGAAACTGTTAGGGATTTACTTTGCCCTGGAAGGCCTCTCGTTCTTAGAGAAGATAAACAGGGGATTGTGGCGGCAGGTCTTACACAATATAGAGCTCATTCTACAGATGAAGTGATGGCATTGCTTCAGCAAGGAAATCTGAACCGAACCACAGAACCAACTCGTGCAAATGAAACGTCTTCGCGTTCCCATGCAATTCTGCAGGTTGTGGTTGAATACCGAGTTAGAGATGCTGCAATGAATATTGTTAACCGAGTGGGCAAGCTCTCACTGATTGATCTTGCTGGGTCAGAGAGAGCTCTTGCCACGGATCAGAGAACACTTAGGTCACTTGAGGGTGCCAATATAAACCGGTCTCTTCTTGCACTCAGCAGCTGCATCAATGCTCTTGTGGAAGGCAAGAAACACATACCGTATCGAAATTCGAAACTCACCCAACTTCTCAAGGACTCGCTGGGAGGAACTTGTAACACTGTCATGATTGCAAACATTAGCCCGAGTAACCTCTCATTTGGTGAAACTCAGAACACCGTTCATTGGGCTGATAGAGCCAAGGAGATTCGGGCAAAGGTAAGCGATGCCAGTGAGGATATATTGCCCATGCCTGAGACAGAAACTGACCAGGCCAAGCTAGTACTTGAGCTGCAAAAGGAGAATCGTGAATTGAGAGTGCAGCTAGCACGGCAACAACAGAAGCTGTTGACTCTAGAAGCACAGTCCTTGGCTTCACATTCCTCTCCAACACCACCTTCAGCCACAGCTCTTTCCACTCCTCCAACCTCTGCCCAACCAACTGAAAAACGAAGGACGAGGTCCTCTTTCTTGGCTGGGACTTGTTTCACTCCGGAAACCAAGAAGAAGGGAGCCGAGCTAGCAGTGAGGACACTACAACGGACTGTGAAAGCACTAGAGGCTGAGATAGAGAGAATGAAGAAAGGTCATAGCTTGCAGCTAAAGCAAAAAGATGATCTTATCCGCGAGCTTTCACAAAAGGGTGGGAAACAAGCATCAACAACTGGGGGAGAAGTGGGAAAGAAAGCGGTAACCCGGGCTAGCAGCCTACAGGCAAAGGAGCCAAACAATGGCGAATTGAAGAGTCCAAGTCACCGTTTTCGATCACCAGTCCCAACTGCCAAGAAACGAAGCTTTTGGGACATAACGACAACTAATAGTCCATCAGTTACTACATTAAATGGGAGAAAAACTAGAAGTCATGTCCTTTCAGAACCTACTACTGCACCTCCTCCATCCATGCTTCTTCAGGGAGTGGAAGAGGAAGTTGCCAGAACACAGGGAAGCTCAGTATTTATATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00084	321774	324879	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000084s00009529.1	PF00225.18	Kinesin	151	475	2.90E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.415
SRR1783600	control	6.439
SRR1783602	moderate drought stress	3.923
SRR1811619	moderate drought stress	3.985

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.209
DRR006520	Root Summer glycyrrhizin high producing strain	6.191
DRR006521	Root Winter glycyrrhizin high producing strain	1.841
DRR006522	Root Winter glycyrrhizin high producing strain	1.930
DRR006523	Root Summer glycyrrhizin low producing strain	5.289
DRR006524	Root Summer glycyrrhizin low producing strain	5.303
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.541
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.506

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.858
SRR2868004	Drought Stress (root)	4.031
SRR2967015	Control (root)	5.379

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.862
SRR9715740	Leaf	0.209
SRR9715741	Leaf	0.911
SRR9715739	Root	1.030
SRR9715742	Root	3.079
SRR9715743	Root	2.840

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.389
SRR8749028	MeJA induced 9h	2.343
SRR8749029	MeJA induced 9h	1.268
SRR8749030	Uninduced	0.118
SRR8749031	Uninduced	0.088
SRR8749032	Uninduced	0.324

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.163
SRR8400027	Control - Root	7.517