Gene detail

Gene detail information of Glyur000084s00009522

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G25610.1	0	ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
NR	XP_003525635.1	0	PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max]
COG	NP_266834.1	1.00E-20	cation-transporting ATPase [Lactococcus lactis subsp. lactis Il1403]
Swissprot	tr\|Q9SX33\|ALA9_ARATH	0	Putative phospholipid-transporting ATPase 9
trEMBL	tr\|I1K184\|I1K184_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G07730.1}

Sequence

Transcript Sequence

>Glyur000084s00009522.1
CTTTCATCTCTGTGAAGAGAAAGAAAACAAGCCTCCATTTTTTCATTTCATTTCATTTCATTTCTGGGTGTACAGAGAAAAACAAAACAATTCTTTTTGGTTCATAGTTCAAAGTTGATTTGGTTGGTTTTATTGTTGGTTGGTTTCAAAAATTGGTTTTTGAGGAACATTTGAGTCATTGGAGCTTAGTTGAAAAAACTTGAGAGAGCTGAAGCTGACACAAGTCTATTTATTAAGCCTTTTGGTGTTGTTGGGTTGGAGGAATTATGGCTGGGGAAAGAAAGAGGAGGCACCACTTCAGCAAGATCCATGCATTCAAGTGTGGGAAATTAGCTTCCAATTCGGTGAAAGATGAGCAATCGCTTCTAGGAGGCCCTGGATTCTCAAGGAAAGTCTATTGCAACGACCCAGAACGTGCTATGTCTAGTCTTTTGAATTACGGTGACAATTATGTCAGAACCACCAAGTATACATTGGCCACGTTTATCCCAAAGTCCTTGTTTGAACAGTTCAGGAGGGTTGCCAATTTCTACTTCCTTGTAGTTGCAATTTTGTCTTTCTTCCCGGTTGCTCCTTACTCTGCCGTCAGCAATGTTGTTCCTCTAGTGGTTGTGGTAGCCGCTACTATGATCAAAGAGTTCATCGAGGATTTCAGGCGCAAACAGCAGGATATAGAGATGAATAACAGAAAAGTTAAACTACATCGTGGAGGTGGTGTTTTTGACTATTCTAAATGGAGGGATTTGAAAGTTGGGGACATAGTGAAGGTGGAGAAAGATGAGTTTTTCCCTGCTGATCTATTACTACTTTCATCGAATTACGACGANGCGATTTGCTATGTGGAGACCATGAATCTTGATGGAGAAACAAATCTTAAACTGAAACAAGCACTGGAAGGGACTTCAAACTTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCTGTCGTCAGATGCGAAGATCCAAATGCAAATTTGTATACTTTTGTGGGAAGCCTGGAGCTTGAGGATCAACGGTACCCTCTTGCACCTCAGCAGCTACTGCTNAGGGACTCTAAGCTGAGGAACACAGATTTTATCTATGGTGTTGTAGTCTTCACTGGTCATGATACAAAGGTTATGCAGAACTCAACAGATCCTCCATCCAAGAGGAGCAAGATTGAGAAAAGGATGGATAAGATTATCTACTGCCTTTTCTTTCTCCTAATTTTGGTTTCTTTCATTGGTTCCATATTCTTTGGGATTGCAACAGAGGAGGACATTAAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCGAGATTTACTATGATCCAGACAATGCACCAGTTGCAGCAATTCTGCATTTCTTGACAGCACTCATGTTGTATGGTTACTTCATTCCGATTTCCTTGTATGTCTCCATTGAGATTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGCTCACATGTATTATGAGGTAACCGACAAGCCAGCACATGCTCGTACATCGAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTCTCAGATAAAACAGGAACCTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGAAGAGGATTCACAGAAGTTGAGAGAGCTCTATCTAAGAGAAAAGAATCACCTTTAGGTAACAACAAAATTGCANAGGCTGCTGAATCAAAGTCAACCATTAAAGGGTTTAACTTTAAGGATGAAAGGATCATGAATGGGAAATGGGTCAGAGAACCCAATGCCAATGTAATCCACAACTTCCTACGGTTGTTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAAGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGGTTGCAGCCAGAGAGCTTGGGTTTGAATTCTATGAAAGGTCACATACAACTATTTCTGTGCGTGAATTCGACCCTAAATCAGGCATGAAAACTNAAAGGTCCTACAACCTTCTAAATATATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCTGTAATTGTAAGAGATGGAGAGGGGAAACTACTACTACTTAGCAAAGGCGCAGACAGTGTCATGTTTGAAAGACTTGCAAAGAATGGAAGTGAGTTTGAAGAGCAGACTAAGCAGCACATTAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTGATGAGGAAGAGTACAATAAGTTTAACAAAGAGTTGACAGAGGCTAAAAACTTAGTAAGCGCAGATCAGGAGCAGATTGTAGAGGAAATATTAGAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAGGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGGATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACTGCAATTAATATAGGATTTGCTTGTAGTTTGCTTAGACAGGGAATGAAACAAATTATAATTAATTCAGATACTCCAGAAAACAAATCACTGGAGAAGATGGAGGACAAGTCTGCTGCTGAAGCAGCAATTAAGGCAAGTGTTCTTCGTCAAATAAGGGAAGCAAAGGCATTACTTTCTAAATCAGATCAAAACTCTGAGGCGTTAGCTCTCATCATTGATGGGAAGTCTCTTACTCATGCACTAGAAGATGATGTAAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATTTGCTGTCGTTCATCTCCTAAGCAAAAAGCACTTGTTACAAGACTGGTTAAGAGCAAAACTGGTACAACTCTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGATATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGATATTTCCATTGCCCAATTTCGGTTTCTNGAGCGCTTACTTCTTGTGCATGGTCATTGGTGTTACAGAAGGATCTCGTCCATGATCTGCTACTTCTTTTACAAGAATATAGTCTTTGGCTTCAGTCTTTTCTTCTTCGAAATCTTTGCCTCATTCTCAGGTCAAGCTGCATACAATGACTGGTTCATGTCATTTTACAACGTATTCTTCACTTCGCTTCCTGTAATTGCTTTGGGAGTGTTTGACCAGGATGTCTCTTCCAAATTATGTCTCAAGTTTCCATTATTATATCAAGAAGGTGTGCAGAACATTCTATTTAGCTGGAAAAGAATCATTGGTTGGGCACTAAACGGTGTTATAAGTTCTGCCATCATATTCTTCTTCTGTATTCGCGCTATGGAGCATCAAGCATTCCGCGAAGGTGGTCAAGTTGTTGACATGCAAATCCTTGGTGCCACATTGTACACTTGTGTTGTGTGGGTGGTGAATGTCCAAATGGNATTATCCATCAGTTACTTCACTTACATACAACACATATTCATCTGGGGAAGCATTATAATCTGGTATCTATTCCTCTTGGCATATGGTGCCATAGAACCTTCTCTATCAACCACTGCCTACAAGGTCTTCATTGAAGCATGTGCACCAGCACCATCTTACTGGATTGTGACTTTGCTTATTGTTATTGCTTCCCTCCTTCCATATTCNGCCTATGCTTCGATCCAAATGCGTTTCTTCCCCATGTATCATCAGATGATACAGTGGATAAGAAAGGATGGGCAAACAAGTGATCCAGAATTCTGTAATGTGGTGAGGCAGAGATCGATAAGACACACAACGGTTGGATTCACCGCTCGTTTGGAAGCTTCCAGACGTTTCGAAGCATCCAAACGTTCTGAAGCATCCATAGCAGCATCTATACCTTTTGAAGGGAGGTCTGGGAACCATTAACCAGATAGTGTTTTTTTGTTTTGTTTTTGTTTATTATCCCTTGTTGTATGTCAAATTCATTAGTTAAAACATAGGTGTAAATTTTTGCCATAGGTTACGACCTTCTTTCATTTGTACATATTTAAGATAAAGTGGCAGNCTTGTGCTGCATGACGAGTATTCTTTAATGAAGCCAAATTGAGGCAATCTGCCCCTTGGATTTTGTTCAAAAGATTATAATAAAATTTGGCTGCTTAAAGATCAGAAATAAGGTTACGGTCAACAATGTATCAATCATGGTATATTTTGATTCATTTTTCCATGGTACAA

Protein Sequence

>Glyur000084s00009522.1
MAGERKRRHHFSKIHAFKCGKLASNSVKDEQSLLGGPGFSRKVYCNDPERAMSSLLNYGDNYVRTTKYTLATFIPKSLFEQFRRVANFYFLVVAILSFFPVAPYSAVSNVVPLVVVVAATMIKEFIEDFRRKQQDIEMNNRKVKLHRGGGVFDYSKWRDLKVGDIVKVEKDEFFPADLLLLSSNYDXAICYVETMNLDGETNLKLKQALEGTSNLQEDSSFQNFKAVVRCEDPNANLYTFVGSLELEDQRYPLAPQQLLLRDSKLRNTDFIYGVVVFTGHDTKVMQNSTDPPSKRSKIEKRMDKIIYCLFFLLILVSFIGSIFFGIATEEDIKNGRMKRWYLRPDDTEIYYDPDNAPVAAILHFLTALMLYGYFIPISLYVSIEIVKVLQSIFINQDAHMYYEVTDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGFTEVERALSKRKESPLGNNKIAXAAESKSTIKGFNFKDERIMNGKWVREPNANVIHNFLRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVVAARELGFEFYERSHTTISVREFDPKSGMKTXRSYNLLNILEFSSARKRMSVIVRDGEGKLLLLSKGADSVMFERLAKNGSEFEEQTKQHISEYADSGLRTLILAYRELDEEEYNKFNKELTEAKNLVSADQEQIVEEILENIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPENKSLEKMEDKSAAEAAIKASVLRQIREAKALLSKSDQNSEALALIIDGKSLTHALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKSKTGTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDISIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIVFGFSLFFFEIFASFSGQAAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNILFSWKRIIGWALNGVISSAIIFFFCIRAMEHQAFREGGQVVDMQILGATLYTCVVWVVNVQMXLSISYFTYIQHIFIWGSIIIWYLFLLAYGAIEPSLSTTAYKVFIEACAPAPSYWIVTLLIVIASLLPYSAYASIQMRFFPMYHQMIQWIRKDGQTSDPEFCNVVRQRSIRHTTVGFTARLEASRRFEASKRSEASIAASIPFEGRSGNH

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00084	287038	292839	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0015914 phospholipid transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0000166 nucleotide binding

GO:0000287 magnesium ion binding

GO:0004012 phospholipid-translocating ATPase activity

GO:0005524 ATP binding

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000084s00009522.1	PF00122.15	E1-E2_ATPase	113	390	2.60E-17
Glyur000084s00009522.1	PF00702.21	Hydrolase	423	873	9.30E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.139
SRR1783600	control	8.149
SRR1783602	moderate drought stress	8.516
SRR1811619	moderate drought stress	8.622

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.651
DRR006520	Root Summer glycyrrhizin high producing strain	17.339
DRR006521	Root Winter glycyrrhizin high producing strain	3.319
DRR006522	Root Winter glycyrrhizin high producing strain	3.186
DRR006523	Root Summer glycyrrhizin low producing strain	32.305
DRR006524	Root Summer glycyrrhizin low producing strain	32.510
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.601
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.593

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	46.776
SRR2868004	Drought Stress (root)	135.822
SRR2967015	Control (root)	75.538

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	101.431
SRR9715740	Leaf	83.282
SRR9715741	Leaf	161.109
SRR9715739	Root	16.668
SRR9715742	Root	89.111
SRR9715743	Root	74.924

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.523
SRR8749028	MeJA induced 9h	65.108
SRR8749029	MeJA induced 9h	26.036
SRR8749030	Uninduced	130.734
SRR8749031	Uninduced	106.956
SRR8749032	Uninduced	57.007

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	44.179
SRR8400027	Control - Root	57.085