Gene detail information of Glyur000084s00009490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40610.1 | 3.00E-97 | expansin A8 |
| NR | XP_003544930.1 | 6.61E-157 | PREDICTED: expansin-A8 [Glycine max] |
| Swissprot | tr|O22874|EXPA8_ARATH | 7.00E-139 | Expansin-A8 (Precursor) |
| trEMBL | tr|I1JHL8|I1JHL8_SOYBN | 2.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G40230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00084 | 153635 | 155718 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000084s00009490.1 | PF03330.13 | DPBB_1 | 60 | 144 | 2.10E-25 |
| Glyur000084s00009490.1 | PF01357.16 | Pollen_allerg_1 | 156 | 233 | 1.20E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.144 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.143 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.147 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.145 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.124 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.691 |
| SRR2868004 | Drought Stress (root) | 10.900 |
| SRR2967015 | Control (root) | 11.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.680 |
| SRR9715740 | Leaf | 0.810 |
| SRR9715741 | Leaf | 0.619 |
| SRR9715739 | Root | 0.067 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.926 |
| SRR8749028 | MeJA induced 9h | 0.547 |
| SRR8749029 | MeJA induced 9h | 0.251 |
| SRR8749030 | Uninduced | 0.043 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.588 |
| SRR8400027 | Control - Root | 0.391 |