Gene detail information of Glyur000084s00009484 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30395.1 | 2.00E-27 | ovate family protein 17 |
| NR | XP_004490709.1 | 1.62E-74 | PREDICTED: uncharacterized protein LOC101489887 [Cicer arietinum] |
| Swissprot | tr|Q84RF2|OPF17_ARATH | 1.00E-41 | Transcription repressor OFP17 |
| trEMBL | tr|K7M871|K7M871_SOYBN | 4.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G38371.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00084 | 105766 | 106302 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.204 |
| SRR1783600 | control | 0.205 |
| SRR1783602 | moderate drought stress | 0.069 |
| SRR1811619 | moderate drought stress | 0.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.854 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.928 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.394 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.445 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.866 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.780 |
| SRR2868004 | Drought Stress (root) | 10.505 |
| SRR2967015 | Control (root) | 5.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.479 |
| SRR9715740 | Leaf | 0.118 |
| SRR9715741 | Leaf | 0.105 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 0.562 |
| SRR9715743 | Root | 0.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.103 |
| SRR8749028 | MeJA induced 9h | 1.596 |
| SRR8749029 | MeJA induced 9h | 1.189 |
| SRR8749030 | Uninduced | 3.085 |
| SRR8749031 | Uninduced | 0.297 |
| SRR8749032 | Uninduced | 1.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.211 |
| SRR8400027 | Control - Root | 4.968 |