Gene detail information of Glyur000084s00009477 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58375.1 | 4.00E-19 | Methyltransferase-related protein |
| NR | XP_003616005.1 | 1.92E-39 | hypothetical protein MTR_5g075070 [Medicago truncatula] |
| trEMBL | tr|G7KFN2|G7KFN2_MEDTR | 7.00E-40 | Methyltransferase-like protein {ECO:0000313|EMBL:AES98963.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00084 | 46218 | 47056 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.411 |
| SRR1783600 | control | 37.019 |
| SRR1783602 | moderate drought stress | 26.469 |
| SRR1811619 | moderate drought stress | 26.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.270 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.494 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.288 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.166 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.648 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.102 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.066 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.386 |
| SRR2868004 | Drought Stress (root) | 50.456 |
| SRR2967015 | Control (root) | 41.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.464 |
| SRR9715740 | Leaf | 3.000 |
| SRR9715741 | Leaf | 3.545 |
| SRR9715739 | Root | 4.793 |
| SRR9715742 | Root | 12.540 |
| SRR9715743 | Root | 7.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 115.225 |
| SRR8749028 | MeJA induced 9h | 89.273 |
| SRR8749029 | MeJA induced 9h | 109.184 |
| SRR8749030 | Uninduced | 139.993 |
| SRR8749031 | Uninduced | 82.605 |
| SRR8749032 | Uninduced | 106.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.613 |
| SRR8400027 | Control - Root | 40.236 |