Gene detail

Gene detail information of Glyur000083s00007002

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G11910.1	6.00E-168	aspartic proteinase A1
NR	XP_006603753.1	0	PREDICTED: aspartic proteinase 2 isoform X1 [Glycine max]
Swissprot	tr\|P42211\|ASPRX_ORYSJ	0	Aspartic proteinase (Precursor)
trEMBL	tr\|I1NBM7\|I1NBM7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G41320.4}

Sequence

Transcript Sequence

>Glyur000083s00007002.1
CTTTTTTATTTATCTGTGAGACTTGTAGTATGGAAAATAGACTACAAGCACTTTCCATTTCATTCCTGTTCCATGGCTAGTTGNCTTCTGTGTAAAATTAGGGCTTCATCCAGCTTAACTTACTGTAGATTTCCTTGTCAGGCAAATTTTCCTTGAACATGGGGCAAAAGCATTTTGCGGTGGCTTTCTGTTTATGGGCTTTAACATGTTCCTTGCTTCCATNTTTCTCCTATGGAATTATGAGAATTGGTTTGAAGAGGAGACCTCTAGATCTTCATAGTATTAATGCTGCTAAAAAGGCAAGAGCAGAACTGCAATCGGCAAGACCAATGATGGGTGCACATGATCAGTATATTGGTAAGTCCAGTGATGAAGATATAGTACCTTTGAAGAATTATTTGGACGCTCAATATTTTGGTGAGATTGGAATCGGCACACCCCCGCAGACCTTTACTGTCATATTTGATACCGGTAGTTCCAACCTCTGGGTTCCATCATCAAAGTGTTACTTTTCTCTTGCCTGCTATACCCATAATTGGTACAAGTCAAAGAAATCCAAAACATATACCAAAAACGGAACATCATGTAAAATAAGCTATGGATCTGGATCAATATCTGGTTTCTTCAGTCAAGATAATGTTAAAGTTGGTGATGTTGTTGTCAAGCATCAGGATTTCATTGAGGCTACCCGAGAAGGAAGTCTTACTTTTCTGTCAGCAAAGTTTGATGGAATACTTGGGCTTGGATTTCAGGAGATCTCAGTTGAAAACTCTGTGCCAGTATGGTACAATATGATGGAGCAAGATCTTATCAGTGAGAAGGTGTTCTCTTTTTGGCTCAATGGGAATCCCAAGGCAAAAAAGGGTGGTGAAATAGTTTTTGGTGGTGTTGACCCTAAGCATTTCAAAGGAGAACACACTTATGTCCCAGTTACTCAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTCTTCATTGGAGGTGTTTCAACAGGTGTTTGTGAAGGTGGCTGTGCTGCCATTGTGGACTCGGGAACATCTTTGCTTGCTGGTCCAACACCTGTTGTGGCTGAAATCAATCATGCTATTGGAGCTGAAGGAGTTCTGAGTGTAGAATGTAAGGAAGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCTTAGTATCCGGGGTACAACCTGGTGACGTATGTTCACAAGTTGGTTTATGTTCTGCCCACAGGGGTCAATCTAAGAGTGCTGGGATTGAGATGGTGACTGAAAAGGAACAGATGGCGTTGTCAGCTAGAGATACTCCTTTGTGTTCATCTTGTCAGATGCTTGTTCTTTGGATTCAGAATCAACTAAAACAAAAGTCGACCAAGGAAAGAGTATTCAACTACGTGAATCAACTGTGCGAGAGTCTGCCAAGTCCATCTGGAGAGTCAGTGATAAGCTGTGATAATCTTTCTCGGATGCCAAACATTACATTCACTATTGGAGGCAAACCCTTCATCCTCACACCAGAGCAGTATATTCTAAGAACTGGAGAAGGCATTACAGAGGTCTGCCTTAGTGGGTTTATTGCTTTTGATGTTCCTCCTCCACGGGGTCCACTCTGGATTCTTGGCGATGTTTTCATGAGGGTATATCACACTGTCTTCGACCACGGAAATCTCCAACTTGGCTTTGCTGAAGCTGCCTAGTTAAGCGTTGTGGAGGATTTATCTTTAGGAATGTTTTAATAATTCCGTTCTGTGTGTTGTAAATAAGCTGTTATATAACTTTGTAACTACGATAGCTCAAGCTCAGGTTCACTTCATGGATTCACAAATGTATTTATCTATGCAGGTACGATAAGACGTGAAAATATCCACTTGGAACTAGGAGTATTGTGTACTTTTATGTGAAAGTATGAAAGAACCATTTTCATTTCATTCCGAGTTCATGCTGTATATTGTAAGACCCTCTTCTCTAGGCGACGATGGTTGCCCATGGATGAGTAGTATAAAACACCATTGGCATTGTTTGCCAAAAGAACCAAAGGGATAAGACAGAAAAGCTAAATTGATTTTAAGACGGCTCCAGAAATGTTTCCCATTACTGTGAGAACAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00083	349802	353586	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006508 proteolysis

GO:0006629 lipid metabolic process

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000083s00007002.1	PF00026.18	Asp	84	507	3.80E-126
Glyur000083s00007002.1	PF03489.12	SapB_2	319	351	6.70E-15
Glyur000083s00007002.1	PF05184.10	SapB_1	380	417	5.00E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	142.078
SRR1783600	control	142.825
SRR1783602	moderate drought stress	176.149
SRR1811619	moderate drought stress	174.900

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	273.452
DRR006520	Root Summer glycyrrhizin high producing strain	270.897
DRR006521	Root Winter glycyrrhizin high producing strain	257.582
DRR006522	Root Winter glycyrrhizin high producing strain	250.184
DRR006523	Root Summer glycyrrhizin low producing strain	289.963
DRR006524	Root Summer glycyrrhizin low producing strain	290.089
DRR006525	Leaf Summer glycyrrhizin high producing strain	120.775
DRR006526	Leaf Summer glycyrrhizin high producing strain	119.684

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	422.485
SRR2868004	Drought Stress (root)	528.918
SRR2967015	Control (root)	625.659

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	150.221
SRR9715740	Leaf	162.547
SRR9715741	Leaf	182.043
SRR9715739	Root	108.082
SRR9715742	Root	194.505
SRR9715743	Root	177.730

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	118.344
SRR8749028	MeJA induced 9h	247.604
SRR8749029	MeJA induced 9h	121.679
SRR8749030	Uninduced	131.948
SRR8749031	Uninduced	136.417
SRR8749032	Uninduced	124.688

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	296.168
SRR8400027	Control - Root	317.522