Gene detail

Gene detail information of Glyur000083s00006989

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G09450.1	6.00E-163	Protein kinase superfamily protein
NR	XP_006604781.1	0	PREDICTED: serine/threonine-protein kinase haspin-like [Glycine max]
trEMBL	tr\|K7MZR6\|K7MZR6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G41380.2}

Sequence

Transcript Sequence

>Glyur000083s00006989.1
ACTACCGTTGCTCATCAGTCAAAACNTTTTGGGAATAGGAGTAGATGCATTCTCAAGAGGTTCCCGCCGGGGCAGTGTTTCAAACTGGGTACGATCGATGAGCAGAAGCAGAAGCAATGGCACGAAAACAATGAGCACGAGCACAGGTTCCAAGTCCAAANCAGTTGAGGGGATGGAAATCCCTCCTCACCTTTCTCACTGCCCCTCTTTCCCACCACCACCACCACCGACTTCCCTTCATCTATGGTCACCAATCGTGGCCACTGATTCTGAAACCCAACAGCACCGCAATCAAATCGACGTCGTTTACCGGAGAAGAAAGCCTCGCCACAACCTAAATGATGCTAACTCAAAGCATTCCGATCCTAGTCGCCCGCGTCCGAGTCGGGTGAGTTTGGCCGACCCAAACAAGCGAGTCAGTTGGAATCGTTCTCTTTCCACCAGAGGGAGGACAAGTATAGCNGTTGGTGCTTGTATGGTTTACCAGCCTCAGCTAAAGCAGGACAAAAGAAAAGGGAAACCTGCTCTTCCCAAACCCAAAGGGAAGTTTGTTAAACCTCCAAACTTTGACAAGGAGAAATTATACTTTCAAGAGGTTGATGCTTTTGAGTTGTTGGAGGAGAGCCCTTCGCCAAAGAAAGTTGGCACATGGACCATAGGCAATACNACGGAAGAGGGCCCAATACCAGCTGTATGCTCCAGATTAGAAAAATGGTTACAGTCCAGAAAATTAAACCCCAGCTGCGGTCCATCTAGCACACTATCCAAGATACTAGATACCCCAGCTATGGGTTTTGAAACTATTCATGATATTGATTTCAATTCTCCAGACTTAAGANCATTGGAACGAACCGGGCTAAGCAATTCACAATTGCATATCGTCAAAACTGGAGAAAATAAAAGTTTNATCGATGCAAGTCTTATTGAGAGTGACACTAGTTTGCAATCAAACGATAAGATGTTGTTAGCTCAAAATGGCCAACGCTGTGAAGATATAGAAGCTGCTGTTAAGAAACTTTCTCTGGCATCAGTATCATCCTCCATAGATGATGACCATATTAGTCCATTTTCTGCTTTATTAAGAATTTGTGGACAGTCTGCACCTTCAATGCTACAAGATATGATCTATAGTGGTTCAGAAACTGTTGTGAAAATTGGTGAAGGAACATATGGAGAAGCTTTCAAGGTTGACAATTATGTCTGCAAAATAGTTCCTTTTGATGGGGACTTCAGAGTGAANGGGGAAGTCCAAAAGAGATCAGAAGAATTGCTGGAGGAGGTGCTTCTTTGCAAAACTCTTAATCAGTTGAGNGGAAATGGTGGAGATTCTAATAATCTATGCAGAACATTCATAGAATCCATAGAATTTAGAGTATGCCAAGGTGCTTATGATCCAGCACTGATTCGAGCATGGGAAGATTGGGATCANAAACATGGTTCAGAGAATGATCACCCAAAAGAGTTCCCACACAAACAGTGTTACATGGTCTTCGTACAAGGACATGGTGGCAAGGATCTTGAAAGTTTTGTGCTCCTGAATTTTGATGAGGCAAGGACTCTACTGGTTCAGGTTGCAGCAGGGCTTGCTGTAGCNGAGTCTGCATTTGAATTTGAACATCGAGATCTTCACTGGGGAAATATACTTGTCAGCCGAAGTGATTCGGTCACATTGCAGTTCACTCTCGATGGAAGGAATGTGTTAGTCAAAACATATGGATTGACAATATCTATCATTGATTTTACTCTATCAAGAATAANCGCAGGTGACAGAATACTGTACTTTGATCTTTCNTCCGATCCTGAACTATTCACAGGTCCAAAAGGGGATAAACAGTCAGAAACTTATAGAAGGATGAAGGAGGTGACTGAAGATTGGTGGGAAGGAAGTTATCCTAAAACAAATGTGTTATGGTTGGTCTACTTGGTGGACATACTCCTCACCAAGAAATCATTTGAACGTACTTCTAAGGACGAGAGAGATCTACGCTCCTTGAAGAAACGTCTTGACAAGTATAATTCGGCCAAGGAAGCAATTTCTGATCCCTTCTTCACTGACTTGTTTGTTGAGTCTGATCCAAAGGCTTAACAAGCAAGCTAAACCTCCGTTAATTACTTGTTAATTATATATAGTTAGTTGGGCAGTTGCTTTTCTGTTACGAGTTTGTTAGCTCCTCTTTTGTATATATGCATAATGCATCGTTATATGTAAAGCCTAAATTAGATCAGTTGCTCATTTTGCATGTAAGTTCGTTCGTCATCGTTATATGTTTACTTCGTTTGTGAAGTGAAAATGTGATCGAAATGTGGGAATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00083	290255	296122	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000083s00006989.1	PF12330.3	DUF3635	569	636	5.80E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.163
SRR1783600	control	1.181
SRR1783602	moderate drought stress	1.494
SRR1811619	moderate drought stress	1.454

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.636
DRR006520	Root Summer glycyrrhizin high producing strain	1.418
DRR006521	Root Winter glycyrrhizin high producing strain	0.288
DRR006522	Root Winter glycyrrhizin high producing strain	0.234
DRR006523	Root Summer glycyrrhizin low producing strain	1.382
DRR006524	Root Summer glycyrrhizin low producing strain	1.469
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.838
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.796

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.890
SRR2868004	Drought Stress (root)	2.701
SRR2967015	Control (root)	3.477

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.413
SRR9715740	Leaf	0.359
SRR9715741	Leaf	0.571
SRR9715739	Root	0.402
SRR9715742	Root	1.060
SRR9715743	Root	0.775

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.114
SRR8749028	MeJA induced 9h	6.100
SRR8749029	MeJA induced 9h	3.422
SRR8749030	Uninduced	1.046
SRR8749031	Uninduced	1.009
SRR8749032	Uninduced	0.700

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.991
SRR8400027	Control - Root	3.817