Gene detail information of Glyur000083s00006947 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26920.1 | 1.00E-64 | Cam-binding protein 60-like G |
| NR | XP_003520794.1 | 0 | PREDICTED: uncharacterized protein LOC100816427 [Glycine max] |
| trEMBL | tr|K7KGL1|K7KGL1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G39170.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00083 | 66112 | 69512 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000083s00006947.1 | PF07887.6 | Calmodulin_bind | 93 | 396 | 1.20E-95 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.476 |
| SRR1783600 | control | 0.474 |
| SRR1783602 | moderate drought stress | 0.529 |
| SRR1811619 | moderate drought stress | 0.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.468 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.343 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.134 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.910 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.871 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.990 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.736 |
| SRR2868004 | Drought Stress (root) | 90.306 |
| SRR2967015 | Control (root) | 77.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.458 |
| SRR9715740 | Leaf | 6.247 |
| SRR9715741 | Leaf | 34.696 |
| SRR9715739 | Root | 0.196 |
| SRR9715742 | Root | 2.524 |
| SRR9715743 | Root | 1.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 76.871 |
| SRR8749028 | MeJA induced 9h | 169.180 |
| SRR8749029 | MeJA induced 9h | 118.707 |
| SRR8749030 | Uninduced | 250.343 |
| SRR8749031 | Uninduced | 246.683 |
| SRR8749032 | Uninduced | 131.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.526 |
| SRR8400027 | Control - Root | 9.773 |