Gene detail information of Glyur000083s00006945 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G56300.1 | 2.00E-52 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004494547.1 | 6.16E-105 | PREDICTED: dnaJ homolog subfamily B member 6-like [Cicer arietinum] |
| COG | YP_004062659.1 | 1.00E-16 | molecular chaperone protein DnaJ [Candidatus Liberibacter solanacearum CLso-ZC1] |
| Swissprot | tr|Q9FL54|DNAJ6_ARATH | 6.00E-15 | Chaperone protein dnaJ 6 |
| trEMBL | tr|C6T583|C6T583_SOYBN | 3.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41760.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00083 | 56032 | 57662 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000083s00006945.1 | PF00226.26 | DnaJ | 14 | 79 | 1.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.280 |
| SRR1783600 | control | 42.062 |
| SRR1783602 | moderate drought stress | 82.337 |
| SRR1811619 | moderate drought stress | 80.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 146.479 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 143.135 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 104.643 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 103.988 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 350.382 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 351.395 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 76.594 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 76.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.355 |
| SRR2868004 | Drought Stress (root) | 13.609 |
| SRR2967015 | Control (root) | 61.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.749 |
| SRR9715740 | Leaf | 31.230 |
| SRR9715741 | Leaf | 16.186 |
| SRR9715739 | Root | 8.635 |
| SRR9715742 | Root | 13.470 |
| SRR9715743 | Root | 13.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.770 |
| SRR8749028 | MeJA induced 9h | 48.414 |
| SRR8749029 | MeJA induced 9h | 67.701 |
| SRR8749030 | Uninduced | 48.521 |
| SRR8749031 | Uninduced | 34.284 |
| SRR8749032 | Uninduced | 97.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.063 |
| SRR8400027 | Control - Root | 19.873 |