Gene detail information of Glyur000082s00007615 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007154324.1 | 3.40E-59 | hypothetical protein PHAVU_003G109000g [Phaseolus vulgaris] |
| Swissprot | tr|P17642|PRS2_SOLTU | 1.00E-36 | Pathogenesis-related protein STH-2 |
| trEMBL | tr|V7CAE0|V7CAE0_PHAVU | 1.00E-59 | Uncharacterized protein {ECO:0000313|EMBL:ESW26318.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 372258 | 373657 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000082s00007615.1 | PF00407.14 | Bet_v_1 | 4 | 97 | 3.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.722 |
| SRR1783600 | control | 12.345 |
| SRR1783602 | moderate drought stress | 14.008 |
| SRR1811619 | moderate drought stress | 14.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 145.268 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 145.693 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.184 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.055 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 282.193 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 274.556 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.002 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 75.508 |
| SRR2868004 | Drought Stress (root) | 200.709 |
| SRR2967015 | Control (root) | 141.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 202.063 |
| SRR9715740 | Leaf | 165.005 |
| SRR9715741 | Leaf | 356.965 |
| SRR9715739 | Root | 17.175 |
| SRR9715742 | Root | 41.877 |
| SRR9715743 | Root | 35.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 172.490 |
| SRR8749028 | MeJA induced 9h | 285.674 |
| SRR8749029 | MeJA induced 9h | 332.206 |
| SRR8749030 | Uninduced | 1675.073 |
| SRR8749031 | Uninduced | 2340.363 |
| SRR8749032 | Uninduced | 1407.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 66.917 |
| SRR8400027 | Control - Root | 66.537 |