Gene detail information of Glyur000082s00007612 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN03328.1 | 2.05E-73 | Major allergen Pru av 1 [Glycine soja] |
| Swissprot | tr|P93330|NOD13_MEDTR | 7.00E-48 | Nodulin-13 |
| trEMBL | tr|I1MRM5|I1MRM5_SOYBN | 8.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G03340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 367263 | 368278 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000082s00007612.1 | PF00407.14 | Bet_v_1 | 45 | 132 | 1.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.226 |
| SRR1783600 | control | 46.010 |
| SRR1783602 | moderate drought stress | 15.489 |
| SRR1811619 | moderate drought stress | 15.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.971 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.725 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.257 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.726 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.727 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.453 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.776 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 353.352 |
| SRR2868004 | Drought Stress (root) | 788.784 |
| SRR2967015 | Control (root) | 574.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.886 |
| SRR9715740 | Leaf | 3.126 |
| SRR9715741 | Leaf | 8.101 |
| SRR9715739 | Root | 31.246 |
| SRR9715742 | Root | 123.883 |
| SRR9715743 | Root | 110.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 94.572 |
| SRR8749028 | MeJA induced 9h | 104.476 |
| SRR8749029 | MeJA induced 9h | 135.049 |
| SRR8749030 | Uninduced | 324.056 |
| SRR8749031 | Uninduced | 407.670 |
| SRR8749032 | Uninduced | 154.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 241.613 |
| SRR8400027 | Control - Root | 115.327 |