Gene detail information of Glyur000082s00007610 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24020.2 | 5.00E-05 | MLP-like protein 423 |
| NR | AEV59574.1 | 4.25E-59 | pathogenesis-related protein class 10, partial [Oxytropis splendens] |
| Swissprot | tr|P26987|SAM22_SOYBN | 8.00E-59 | Stress-induced protein SAM22 |
| trEMBL | tr|G9BZW3|G9BZW3_9FABA | 2.00E-59 | Pathogenesis-related protein class 10 {ECO:0000313|EMBL:AEV59574.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 351561 | 352908 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000082s00007610.1 | PF00407.14 | Bet_v_1 | 1 | 125 | 3.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.104 |
| SRR1783600 | control | 24.490 |
| SRR1783602 | moderate drought stress | 62.075 |
| SRR1811619 | moderate drought stress | 62.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.377 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.267 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.381 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.275 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 76.413 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 75.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 67.806 |
| SRR2868004 | Drought Stress (root) | 76.349 |
| SRR2967015 | Control (root) | 14.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 351.835 |
| SRR9715740 | Leaf | 153.604 |
| SRR9715741 | Leaf | 147.457 |
| SRR9715739 | Root | 254.958 |
| SRR9715742 | Root | 65.215 |
| SRR9715743 | Root | 97.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 66.813 |
| SRR8749028 | MeJA induced 9h | 59.784 |
| SRR8749029 | MeJA induced 9h | 154.026 |
| SRR8749030 | Uninduced | 153.733 |
| SRR8749031 | Uninduced | 1381.050 |
| SRR8749032 | Uninduced | 446.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 383.888 |
| SRR8400027 | Control - Root | 343.590 |