Gene detail information of Glyur000082s00007602 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006601396.1 | 1.34E-18 | PREDICTED: leucine-rich repeat extensin-like protein 1-like [Glycine max] |
| trEMBL | tr|I1MRN4|I1MRN4_SOYBN | 5.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G03400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 285300 | 285806 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 132.902 |
| SRR1783600 | control | 135.019 |
| SRR1783602 | moderate drought stress | 135.937 |
| SRR1811619 | moderate drought stress | 136.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 64.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.936 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.506 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.282 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.017 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.016 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.150 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 68.699 |
| SRR2868004 | Drought Stress (root) | 29.011 |
| SRR2967015 | Control (root) | 61.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.675 |
| SRR9715740 | Leaf | 7.185 |
| SRR9715741 | Leaf | 11.508 |
| SRR9715739 | Root | 151.385 |
| SRR9715742 | Root | 113.799 |
| SRR9715743 | Root | 104.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 231.514 |
| SRR8749028 | MeJA induced 9h | 153.589 |
| SRR8749029 | MeJA induced 9h | 143.942 |
| SRR8749030 | Uninduced | 12.239 |
| SRR8749031 | Uninduced | 4.558 |
| SRR8749032 | Uninduced | 25.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 127.330 |
| SRR8400027 | Control - Root | 98.404 |