Gene detail information of Glyur000082s00007584 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16160.2 | 4.00E-57 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
| NR | XP_004508261.1 | 1.02E-110 | PREDICTED: outer envelope pore protein 16-2, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q0WMZ5|OP162_ARATH | 6.00E-81 | Outer envelope pore protein 16-2, chloroplastic |
| trEMBL | tr|G7JMT8|G7JMT8_MEDTR | 5.00E-111 | Outer envelope pore protein {ECO:0000313|EMBL:AES91953.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 178131 | 180102 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000082s00007584.1 | PF02466.14 | Tim17 | 33 | 176 | 5.10E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.350 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.135 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.936 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.635 |
| SRR2868004 | Drought Stress (root) | 1.076 |
| SRR2967015 | Control (root) | 1.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.668 |
| SRR9715740 | Leaf | 2.645 |
| SRR9715741 | Leaf | 0.387 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.220 |
| SRR8749029 | MeJA induced 9h | 0.084 |
| SRR8749030 | Uninduced | 0.413 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.116 |
| SRR8400027 | Control - Root | 0.089 |