Gene detail information of Glyur000082s00007580 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004508157.1 | 2.51E-22 | PREDICTED: uncharacterized protein LOC101505917 [Cicer arietinum] |
| trEMBL | tr|I3SHI9|I3SHI9_MEDTR | 3.00E-22 | Uncharacterized protein {ECO:0000313|EMBL:AFK39731.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 154806 | 155054 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.980 |
| SRR1783600 | control | 54.076 |
| SRR1783602 | moderate drought stress | 125.013 |
| SRR1811619 | moderate drought stress | 118.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 345.126 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 345.017 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.137 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.186 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 374.648 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 369.240 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 231.560 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 228.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.165 |
| SRR2868004 | Drought Stress (root) | 135.608 |
| SRR2967015 | Control (root) | 135.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 157.369 |
| SRR9715740 | Leaf | 186.291 |
| SRR9715741 | Leaf | 136.483 |
| SRR9715739 | Root | 47.973 |
| SRR9715742 | Root | 110.286 |
| SRR9715743 | Root | 80.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.259 |
| SRR8749028 | MeJA induced 9h | 29.583 |
| SRR8749029 | MeJA induced 9h | 35.388 |
| SRR8749030 | Uninduced | 19.374 |
| SRR8749031 | Uninduced | 24.613 |
| SRR8749032 | Uninduced | 45.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.872 |
| SRR8400027 | Control - Root | 103.483 |