Gene detail

Gene detail information of Glyur000082s00007572

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G66658.2	0	aldehyde dehydrogenase 22A1
NR	XP_003529524.1	0	PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max]
COG	YP_002774288.1	2.00E-93	aldehyde dehydrogenase [Brevibacillus brevis NBRC 100599]
Swissprot	tr\|Q0WSF1\|AL221_ARATH	0	Aldehyde dehydrogenase 22A1 (Precursor)
trEMBL	tr\|I1KMR6\|I1KMR6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G36910.1}

Sequence

Transcript Sequence

>Glyur000082s00007572.1
GTGCGAGGAGAAAGACAAGACGCATGGAATCCGATCTGGTTTATTTAATTTATCTCGTGCCAAGTCATATATATAACCATCAAAACCCTGTTTCTCCCCAAAATTTTGTTCCGTTTTCGTTTTCCCCCCTTGTTAACGAAGAATACTATTGTTAATGTCATCGTGTCGAAGCTTGCGCAGATTCCTTCACTGACTGGGAGCATAAGCATAGCATTGTCTTGAAAACACTGCAGAAGCTTAGAGCATCGAAGCCCTAGGCATCGAAGTGGTTTTGTTCGGAGATAGAAAGAGACGTGCTCTGAATCTGCGAAATTCCAATGGCGTTTTGGTGGCCATTGCTCGTTTTAGCATTCGCTTACGGTATCTGTAGGTTCCTTCTCATGCTTATTCCTCCCAAGGTTCCTTCCATTGACGTTGACGTTTCCGACGTGTTGGACGATGGAAACCAAGCGCAGGAGAATAGCTTCATATATGTACCTCCGAGGGGGACATCGCAGCAATCAGGCAAGATCGTTCAGTGCTATGAACCTGCAACTATGAAATACTTGGGATATGTTCCTGCATTGACGCATGATGAGGTCAAGGATCGAGTGGCAAAAGTAAGGAAGGCACAAAAAATGTGGGCAAAGTCCAGCTTCAAGCAAAGACGCTTGTTTCTGCGTATACTTTTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCGCGTGATACTGGAAAGACAATGGTTGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCCATTGGCTACTGTCAGAGGGTGAGCATTGGCTAAAGCCTGAATACCGGTCTTCCGGAAGATCAATGCTTCATAAGAGAGCCAAAGTAGAATTTCACCCCCTTGGTGTAATTGGAGCCATTGTTTCGTGGAATTATCCTTTCCACAATATTTTCAATCCTATGCTGGCAGCAATTTTTTCTGGAAATGGCATCGTGATTAAGATATCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTTCGCATCATCCAATCAGCCTTAGCTGCCATAGGAGCTCCAGAGGATCTTGTTGAGGTGATAACAGGGTATGCTGAAACGGGAGAAGCATTGGTGTCTTCTGTTGATAAAGTCATATTTGTTGGATCGCCTGGTGTTGGGAAGATGATAATGAGGAATGCTGCAGAGACACTAATACCAGTTACGCTGGAACTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCACAAATTGCTGTCAGGGCTGCTCTTCAGTCAAGTGGACAGAACTGTGCTGGGGCTGAGCGATTCTATGTCCACAGGGAAATTTATTCTTCTTTTGTCAGTAAAGTTACCAAAATCATTAAATCTGTTACAGCTGGCCCACCACTTGTGGGAAAGTATGACATGGGAGCTTTATGCTTGCATGAGCATTCTGAAAAGCTTGAAGGCCTTGTAAATGATGCTTTAGACAAAGGGGCTGAAATTGTTGTACGTGGGAATTTTGGACATATAGGTGAAGATGCAGTCGATCAGTATTTCCCCCCAACTGTGATTGTGAATGTAAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAGGAGGCTGTCAAACTTGCAAATGACTCAAAATATGGGCTTGGCTGTGCGGTTTTCTCAGGCAGTCAGAGCCGTGCCAGTGAGATAGCTTCACAAATACATTCTGGGGTAGCTGCAGTTAATGATTTTGCAGCAACGTATATGTGTCAGTCCCTGCCATTTGGAGGTGTGAAACATAGTGGATTTGGACGATTTGGTGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTTAAAGCAGTTGTCGAAGATCGATGGTGGCCTTTTGTCAAAACCAAGATACCTAAGCCTATTCAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00082	120868	128304	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006081 cellular aldehyde metabolic process

GO:0008152 metabolic process

GO:0055114 oxidation-reduction process

molecular_function

GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity

GO:0016491 oxidoreductase activity

GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000082s00007572.1	PF00171.17	Aldedh	60	527	6.30E-124

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.028
SRR1783600	control	3.078
SRR1783602	moderate drought stress	2.192
SRR1811619	moderate drought stress	2.225

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.341
DRR006520	Root Summer glycyrrhizin high producing strain	5.008
DRR006521	Root Winter glycyrrhizin high producing strain	0.791
DRR006522	Root Winter glycyrrhizin high producing strain	0.810
DRR006523	Root Summer glycyrrhizin low producing strain	3.506
DRR006524	Root Summer glycyrrhizin low producing strain	3.677
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.277
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.297

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.686
SRR2868004	Drought Stress (root)	9.289
SRR2967015	Control (root)	11.025

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.482
SRR9715740	Leaf	6.186
SRR9715741	Leaf	2.154
SRR9715739	Root	2.070
SRR9715742	Root	4.172
SRR9715743	Root	3.123

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.916
SRR8749028	MeJA induced 9h	5.891
SRR8749029	MeJA induced 9h	2.347
SRR8749030	Uninduced	1.788
SRR8749031	Uninduced	0.861
SRR8749032	Uninduced	0.290

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.698
SRR8400027	Control - Root	6.174