Gene detail information of Glyur000082s00007564 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22900.1 | 5.00E-25 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_003528619.1 | 1.88E-111 | PREDICTED: dirigent protein 11-like [Glycine max] |
| Swissprot | tr|Q67YM6|DIR11_ARATH | 9.00E-30 | Dirigent protein 11 (Precursor) |
| trEMBL | tr|I1KMR1|I1KMR1_SOYBN | 7.00E-112 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G36860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00082 | 56144 | 56686 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000082s00007564.1 | PF03018.9 | Dirigent | 34 | 179 | 3.40E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.379 |
| SRR1783600 | control | 1.377 |
| SRR1783602 | moderate drought stress | 4.447 |
| SRR1811619 | moderate drought stress | 11.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.340 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.511 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.206 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.593 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.688 |
| SRR2868004 | Drought Stress (root) | 36.205 |
| SRR2967015 | Control (root) | 47.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.653 |
| SRR9715740 | Leaf | 0.886 |
| SRR9715741 | Leaf | 3.391 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 15.829 |
| SRR9715743 | Root | 0.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.478 |
| SRR8749028 | MeJA induced 9h | 4.184 |
| SRR8749029 | MeJA induced 9h | 1.785 |
| SRR8749030 | Uninduced | 1.549 |
| SRR8749031 | Uninduced | 1.261 |
| SRR8749032 | Uninduced | 0.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.469 |
| SRR8400027 | Control - Root | 10.337 |