Gene detail information of Glyur000081s00006785 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03170.1 | 3.00E-14 | FASCICLIN-like arabinogalactan-protein 11 |
| NR | XP_004493964.1 | 9.77E-58 | PREDICTED: fasciclin-like arabinogalactan protein 11-like [Cicer arietinum] |
| Swissprot | tr|Q8LEJ6|FLA11_ARATH | 3.00E-35 | Fasciclin-like arabinogalactan protein 11 (Precursor) |
| trEMBL | tr|G7L2R9|G7L2R9_MEDTR | 3.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:AFK36413.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 245465 | 249594 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000081s00006785.1 | PF02469.17 | Fasciclin | 134 | 211 | 1.60E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.565 |
| SRR1783600 | control | 5.142 |
| SRR1783602 | moderate drought stress | 1.468 |
| SRR1811619 | moderate drought stress | 1.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.285 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.771 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.953 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.572 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.321 |
| SRR2868004 | Drought Stress (root) | 6.035 |
| SRR2967015 | Control (root) | 9.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.653 |
| SRR9715740 | Leaf | 6.141 |
| SRR9715741 | Leaf | 2.603 |
| SRR9715739 | Root | 5.943 |
| SRR9715742 | Root | 10.699 |
| SRR9715743 | Root | 12.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.032 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.044 |
| SRR8749030 | Uninduced | 0.243 |
| SRR8749031 | Uninduced | 0.153 |
| SRR8749032 | Uninduced | 0.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.699 |
| SRR8400027 | Control - Root | 26.937 |