Gene detail information of Glyur000081s00006782 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03170.1 | 2.00E-08 | FASCICLIN-like arabinogalactan-protein 11 |
| NR | XP_003521389.1 | 3.59E-24 | PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine max] |
| Swissprot | tr|Q8LEJ6|FLA11_ARATH | 6.00E-17 | Fasciclin-like arabinogalactan protein 11 (Precursor) |
| trEMBL | tr|I1JPL3|I1JPL3_SOYBN | 1.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G33730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 237686 | 237949 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.757 |
| SRR1783600 | control | 15.436 |
| SRR1783602 | moderate drought stress | 5.282 |
| SRR1811619 | moderate drought stress | 5.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.950 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.152 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.035 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.508 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.901 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.575 |
| SRR2868004 | Drought Stress (root) | 0.872 |
| SRR2967015 | Control (root) | 0.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.354 |
| SRR9715740 | Leaf | 1.076 |
| SRR9715741 | Leaf | 0.476 |
| SRR9715739 | Root | 0.861 |
| SRR9715742 | Root | 1.111 |
| SRR9715743 | Root | 1.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.057 |
| SRR8749028 | MeJA induced 9h | 0.045 |
| SRR8749029 | MeJA induced 9h | 0.015 |
| SRR8749030 | Uninduced | 0.087 |
| SRR8749031 | Uninduced | 0.539 |
| SRR8749032 | Uninduced | 0.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.883 |
| SRR8400027 | Control - Root | 2.217 |