Gene detail information of Glyur000081s00006780 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03170.1 | 1.00E-05 | FASCICLIN-like arabinogalactan-protein 11 |
| NR | XP_004493964.1 | 7.95E-36 | PREDICTED: fasciclin-like arabinogalactan protein 11-like [Cicer arietinum] |
| Swissprot | tr|Q8LEJ6|FLA11_ARATH | 2.00E-20 | Fasciclin-like arabinogalactan protein 11 (Precursor) |
| trEMBL | tr|Q6J193|Q6J193_POPCN | 4.00E-26 | Fasciclin-like AGP 11 {ECO:0000313|EMBL:AAT37954.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 234121 | 237295 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.765 |
| SRR1783600 | control | 8.545 |
| SRR1783602 | moderate drought stress | 1.348 |
| SRR1811619 | moderate drought stress | 1.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.478 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.868 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.095 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.048 |
| SRR2868004 | Drought Stress (root) | 3.310 |
| SRR2967015 | Control (root) | 4.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.724 |
| SRR9715740 | Leaf | 1.541 |
| SRR9715741 | Leaf | 0.703 |
| SRR9715739 | Root | 0.857 |
| SRR9715742 | Root | 1.955 |
| SRR9715743 | Root | 1.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.060 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.104 |
| SRR8749031 | Uninduced | 0.232 |
| SRR8749032 | Uninduced | 0.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.516 |
| SRR8400027 | Control - Root | 4.576 |