Gene detail information of Glyur000081s00006775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42760.1 | 4.00E-13 | |
| NR | XP_006577012.1 | 2.48E-72 | PREDICTED: uncharacterized protein LOC102667501 [Glycine max] |
| trEMBL | tr|K7KFS1|K7KFS1_SOYBN | 8.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G33651.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 194707 | 195195 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000081s00006775.1 | PF07939.6 | DUF1685 | 47 | 89 | 0.00016 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.413 |
| SRR1783600 | control | 0.420 |
| SRR1783602 | moderate drought stress | 0.073 |
| SRR1811619 | moderate drought stress | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.365 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.220 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.282 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.455 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.490 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.399 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.469 |
| SRR2868004 | Drought Stress (root) | 4.384 |
| SRR2967015 | Control (root) | 2.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.186 |
| SRR9715740 | Leaf | 34.213 |
| SRR9715741 | Leaf | 20.625 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.020 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.704 |
| SRR8400027 | Control - Root | 1.464 |