Gene detail information of Glyur000081s00006772 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37100.1 | 8.00E-24 | protamine P1 family protein |
| NR | XP_003625593.1 | 4.10E-71 | hypothetical protein MTR_7g100830 [Medicago truncatula] |
| trEMBL | tr|G7L1S0|G7L1S0_MEDTR | 2.00E-71 | Protamine P1 family protein {ECO:0000313|EMBL:AES81811.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 174321 | 179968 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.409 |
| SRR1783600 | control | 3.486 |
| SRR1783602 | moderate drought stress | 2.631 |
| SRR1811619 | moderate drought stress | 2.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.908 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.740 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.938 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.054 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.112 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.007 |
| SRR2868004 | Drought Stress (root) | 1.667 |
| SRR2967015 | Control (root) | 1.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.929 |
| SRR9715740 | Leaf | 16.914 |
| SRR9715741 | Leaf | 14.980 |
| SRR9715739 | Root | 0.730 |
| SRR9715742 | Root | 1.970 |
| SRR9715743 | Root | 1.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.730 |
| SRR8749028 | MeJA induced 9h | 0.786 |
| SRR8749029 | MeJA induced 9h | 1.198 |
| SRR8749030 | Uninduced | 0.349 |
| SRR8749031 | Uninduced | 0.361 |
| SRR8749032 | Uninduced | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.610 |
| SRR8400027 | Control - Root | 2.824 |