Gene detail

Gene detail information of Glyur000081s00006755

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37050.1	0	Leucine-rich repeat protein kinase family protein
NR	XP_006577007.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like isoform X2 [Glycine max]
COG	YP_001192956.1	1.00E-10	two component regulator [Flavobacterium johnsoniae UW101]
Swissprot	tr\|C0LGI2\|Y1677_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor)
trEMBL	tr\|K7KFR4\|K7KFR4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G33480.2}

Sequence

Transcript Sequence

>Glyur000081s00006755.1
CAACAGTCTACGATTTTGGTAAGGTGCTGTCCCTGTGGGGTTGGCAGTGAGTGAGAGAGTGGCTTTACTGCGTTGGGTTGGGTTGGGTTGGGTTCCGCCATTTTTATGTTGTTTGTCACCTCTCACCAAACCAAAGCTAAGCTTCACNCACTAAGAAATGGAGAGTACCTTACTCTTCTCTTCCTCTCTCGCACTCTTACTNTTTCTTCTACTCCCCTCTCGTTTTTCCTCTGCTCAGATCATGCAAGGTTTTATGAGTTTGGACTGTGGAGGTACAGAAAATTTCACTGATGAAATTGGTCTTGAATGGACTCCTGATGATAAGCTTACTCATGGGGAAACAAGCACCATATCAGTTGCAAACGAGACACGGAAGCAATACACCACGCTACGACACTTTCCTGCTGATTCCAGGAAATACTGCTACACGCTTGATGTTGTCAGTAGGACAAGGTACCTACTGAGGGCCACATTCCTGTATGGGAACTTTGACAAAAACAATGTATATCCCAAATTTGACATTTCTGTTGGGGCTACACATTGGTCTACTATTGTTATATCTGATGCTAACAGTATAGAAAGGCGGGAGCTTATATTCTTGGCTTCAAGTCCAACAGNGAGTGTGTGTTTATCAAATGCNACAACTGGACAGCCTTTTATATCTACACTTGAACTTCGGCAATTCAATGGTTCAGTTTATTTTACGCAATATGAGGAACAGTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCGGAGAGCGATGCTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCTGATTCTGTGAAGAAAGCAAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACCAATGTACCAATTGATGTTAACAGTGACCTACCACCTGTGAAAGTGATGCAGACAGCCGTAGTGGGTACAAATGGATCTCTTACTTACCGGTTGAACTTGGATGGTTTTCCTGGTANTGGTTGGGCAGTCACCTATTTTGCAGAGATTGAAGATTTGGGTCCAAATGAGTCTAGGAAATTCAGGCTAGTGCTTCCAGGCCAGCCTGATCTTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATATATCCCTACCCTTTGTGCTTTCCTTTAGATTTGGCAAGACATCTGATTCTTCCAAGGGACCTCTCCTAAATGCCATGGAGATAAATAAGTATCTGGAGAAAAATGATGGTTCTCCTGATGTAGCAGCTATTTCTGGTGTACTTTCACACTACTCTTCAGCAGACTGGGCACAAGAAGGAGGCGACCCATGTCTTCCTGTTCCATGGTCATGGGTCCGCTGTAGCTCTGATCCACAACCAAGAATAGTTTCAATCTTGTTATCCAGTAAAAACTTAACTGGGAATATTCCTTCGGATATCACCAAATTGGTTGGTCTGGTTGAACTATGGCTTGATGGAAATATGTTGACCGGCCCATTACCAGATTTTACTGGATGCATGGACTTAAAGATCATTCATCTTGAAAACAACCAGTTGACGGGTGTGCTCCCAGCCTCTTTAGCGAACCTTCCAAGTTTGAGGGAACTATATGTACAAAATAATATGTTATCCGGAACAGTACCANCAGATCTTCTGAGCAAGGATTTGGTATTAAACTACTCTGGAAACATTAATCTTCATAGAGGAAGCAGAATAAAGAGTCACATGTATCTTGTTATTGGTTCAGCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTTTTTGTTTATGCATAAAGGCAAGAAAAGATATTATGAGAANGACCACATCGTTTCTGTCCCTACTCAAAGGCCGTCTTCTTGGAAGAGTGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGTGCCACGAACAACTTCGAAAAAAAAATTGGTTCTGGTGGTTTTGGAGTTGTATACTATGGGAAACTGAAAGATGGAATAGAGATAGCAGTTAAAGTTCTAACCAATAATTCCTATCAAGGCAAGCGAGAGTTCTCTAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAGCTTCTTGGGTATTGCCGAGAAGAAGATAGTAGTATGCTTGTTTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGCNCATGGACGAAGTATCAACTGGATTAAACGCCTTGAGATTGCAGAAGATGCTGCCAAAGGTTTATGNTTCAAATTATAATGCTAATGAATTAAGATGATAGAATTAAATATCCCTTTCCGTGTGATTGGTGTGATCAATCACACGTTAATAACTGTATTACTCTCATGTTTGTTCAGGAATTGAATATCTTCACACAGGTTGTGTTCCTGTGGTTATCCATAGNGACTTAAAAAGCAGCAATATTCTCCTTGACAAACACATGAGAGCCAAGGTTTCAGATTTTGGTCTGTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCTAGCATAGTTCGGGGGACAGTAGGATATCTGGATCCTGAGTACTACATTTCCCAGCAGCTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTGTTAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGCATTATTGATCCCTTGCTACGTAATGACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGGCATATGCGCCCATCAATTTCAGAAGTCCTAAAGGAGATCCAGGATGCAATATCTATTGAGAGAGAGGCTGAAACATTGAGAGAAGGCAATTCTGATGAGATGTCAAGAAATTCTTTTCATTCTTCCTTGAACTTGGGTTCAATGGATCTTGGTGCAGCTGAGAGTTACCTGTCAATTGATGAATCCATTACACAGCCTAGGGCAAGATAGATCTCTCTCTTGTAATTAAACAATCATGCACAAATAGTTTTCTATTTCTTCCTCTGATTTTATATTTTTCTCTTTCCTTTTTTTAGTGTTTAGGCCTTGTTCATATGTGGTCTAATTTTGATGCTCCCTCTCCCAGCCAAATGAACAATGTGTATGTGTACTGGAGTTAGTTTGTTATGCATTTCAAAGCATCAATGGCGTTGCATACATTGAATTGCCATTCTGTATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00081	87353	93896	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.8.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004713 protein tyrosine kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000081s00006755.1	PF12819.2	Malectin_like	35	365	2.10E-80
Glyur000081s00006755.1	PF13855.1	LRR_8	441	498	1.20E-07
Glyur000081s00006755.1	PF07714.12	Pkinase_Tyr	603	714	8.60E-20
Glyur000081s00006755.2	PF12819.2	Malectin_like	35	365	1.90E-80
Glyur000081s00006755.2	PF13855.1	LRR_8	441	498	1.10E-07
Glyur000081s00006755.2	PF07714.12	Pkinase_Tyr	573	684	8.10E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.038
SRR1783600	control	6.960
SRR1783602	moderate drought stress	8.009
SRR1811619	moderate drought stress	8.143

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.156
DRR006520	Root Summer glycyrrhizin high producing strain	11.912
DRR006521	Root Winter glycyrrhizin high producing strain	3.279
DRR006522	Root Winter glycyrrhizin high producing strain	3.119
DRR006523	Root Summer glycyrrhizin low producing strain	9.492
DRR006524	Root Summer glycyrrhizin low producing strain	9.267
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.268
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.403

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.499
SRR2868004	Drought Stress (root)	17.961
SRR2967015	Control (root)	21.948

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.107
SRR9715740	Leaf	1.092
SRR9715741	Leaf	1.484
SRR9715739	Root	4.248
SRR9715742	Root	11.970
SRR9715743	Root	9.845

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.437
SRR8749028	MeJA induced 9h	1.322
SRR8749029	MeJA induced 9h	1.191
SRR8749030	Uninduced	0.212
SRR8749031	Uninduced	0.164
SRR8749032	Uninduced	0.328

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.597
SRR8400027	Control - Root	20.865