Gene detail information of Glyur000081s00006745 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53470.2 | 4.00E-34 | |
| NR | KHN02373.1 | 1.13E-67 | hypothetical protein glysoja_002397 [Glycine soja] |
| trEMBL | tr|I1NA51|I1NA51_SOYBN | 4.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 57570 | 58231 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.417 |
| SRR1783600 | control | 0.392 |
| SRR1783602 | moderate drought stress | 0.849 |
| SRR1811619 | moderate drought stress | 0.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.376 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.332 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.123 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.613 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.255 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.159 |
| SRR2868004 | Drought Stress (root) | 3.744 |
| SRR2967015 | Control (root) | 1.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.910 |
| SRR9715740 | Leaf | 51.775 |
| SRR9715741 | Leaf | 32.808 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.556 |
| SRR9715743 | Root | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.247 |
| SRR8749028 | MeJA induced 9h | 0.459 |
| SRR8749029 | MeJA induced 9h | 1.060 |
| SRR8749030 | Uninduced | 0.115 |
| SRR8749031 | Uninduced | 0.374 |
| SRR8749032 | Uninduced | 0.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.125 |
| SRR8400027 | Control - Root | 2.191 |