Gene detail

Gene detail information of Glyur000081s00006738

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37260.1	3.00E-86	WRKY family transcription factor family protein
NR	XP_003520637.1	0	PREDICTED: WRKY transcription factor 44 isoform X1 [Glycine max]
Swissprot	tr\|Q9ZUU0\|WRK44_ARATH	8.00E-111	WRKY transcription factor 44
trEMBL	tr\|K7KFQ7\|K7KFQ7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G33376.1}

Sequence

Transcript Sequence

>Glyur000081s00006738.1
ATAATGCAGCGAAGCCAACTTGCCTCTATTTAGCATATGCGTATATGTTGCTGCTTCTTCTCGGCTTTCTGAATCAAACATAAAGGGAGCATACTTTGTGAAACATACATAGCCATTGATGATGGATATTGAGGAAGCAGAAAGGGTGGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTACTTTCAAATCATTCTCAGAGCTTCTAGCAGGTGCAATCAATGCCTCTCCCCCAATTGCATCTTCTCATCAAACTACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAGCAGCAGCAATGAATCGCCCCCCTGCTGGGTCTGTTTCTTCTCAGGCTGATATTTTTGGAGCTGCACTCAGCAATTCTTCTGACATGAGTCCTAAACCTGACACCAAGCAGTCTCTCATATACAAGCCAATGGCAAAACTTGTGTCAAAGACGACTGTTTCTCTTTTGGCAAATATGCAGAACCTGGAGGAAGACCAAAAGGCTTTAACATCCTCAAACACAACCAATGGCGATAGACCTTATGATGATGGGTATAATTGGAGGAAATACGGGCAGAAGCAAGTAAAAGGAAGCGAGTTCCCGCGGAGTTATTACAAGTGCACACATCCTAATTGTCCAGTTAAGAAGAAGGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATTCAAAGCCACAGCTTCCCAAGCGCAACACAGGATCAGGGACACAACAAGGATCTGATGGAATGGTTCAAGATATATGGAGCAATAATAATCAAAGTGAGAGGAATGAAGGGAGAATAGAGAACAACCAGAATGACACAACAGGACTGTCTGTGCGTTCAGCTTATCATGTCAAAGCTCCACAGCCTAATGATTCTGCTCTGATTGGTGGTGCAATTAATGCTGGTGGAGGGAGCCTAGAAAATTCGTGTGGTCTGAGTGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGAACCCAGATGTAAAAGAAGGAAAAATGAGAATCAATCCAATGAAGCGGCAGCATCAGAGGAAGGTTTAGTAGAGCCACGCGTTGTGATGCAAAGCTCTATGGATTCTGAAATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAAGTGGTGAAAGGCAATCCATATCCCAGAAGTTATTATAGATGTACTAATGTGAAGTGTAACGTTCGCAAGCACGTGGAGAGAGCAATGGATGACCCGAGATCATTTGTGACTACATATGAAGGAAAGCACAACCATGAGATGCCACTGATCAAGAACACAGGAAGTAGTGTGGCCTCTGAAAAAGATTCACAAGCTTCTCTTAGCAAAGATAAACCATGTTGAGTATTGACACTTCAAAATTAATTAGTACTTAACAAGAACAGTATATATATAACTAAATGGGAATAGATCCTCTTATGATAGATTTTCACATGACCTTGCCATGTGAAAACATATTGTGTGTGTCTCTCTCTNTTGATAGATTTTCACAAATTTTGATAGGCTTGACACAACCCATCATTTGAAATGATCTATTCCCGTTATCCTAAATTATGCTCATATATAATAAGTGAAGTTCATCATCAGAAGATGATGGCAGTTTCGATTAATGCAGCAACTACTGATAATAACAGTATTGGTGGTGGTAATTTGTATTCAGGAATCAGTAGTATTGTGGGANCGTTGTCCTTCAATGACTTTCCACCTCTGCTAGCTGCCTTTGTATACGAAATCTATCTGCTCCCATATTTTGTCATTATGTACAATTATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00081	28743	35537	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000081s00006738.1	PF03106.10	WRKY	144	201	2.30E-31
Glyur000081s00006738.1	PF03106.10	WRKY	340	397	3.90E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.198
SRR1783600	control	3.937
SRR1783602	moderate drought stress	2.022
SRR1811619	moderate drought stress	2.257

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.452
DRR006520	Root Summer glycyrrhizin high producing strain	1.237
DRR006521	Root Winter glycyrrhizin high producing strain	1.242
DRR006522	Root Winter glycyrrhizin high producing strain	1.151
DRR006523	Root Summer glycyrrhizin low producing strain	1.601
DRR006524	Root Summer glycyrrhizin low producing strain	1.821
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.170
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.625

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.508
SRR2868004	Drought Stress (root)	1.453
SRR2967015	Control (root)	2.518

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.190
SRR9715740	Leaf	13.444
SRR9715741	Leaf	9.775
SRR9715739	Root	0.020
SRR9715742	Root	1.376
SRR9715743	Root	1.192

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.134
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.164
SRR8749030	Uninduced	0.192
SRR8749031	Uninduced	0.042
SRR8749032	Uninduced	0.063

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.284
SRR8400027	Control - Root	5.509